Detailed information NTG0998069

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ELZ63_RS06235
• Genome accession: NZ_LR134171
• Coordinates: 1256328..1257668 (-)
• Length: 446 a.a.
• NCBI ID: WP_065245263.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain NCTC12699
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1251328..1262668

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ELZ63_RS06215 (NCTC12699_01238)	-	1251674..1253194 (-)	1521	WP_048954502.1	Na+/H+ antiporter NhaC family protein	-
ELZ63_RS06220 (NCTC12699_01240)	-	1253637..1254041 (+)	405	WP_005647241.1	H-NS family nucleoid-associated regulatory protein	-
ELZ63_RS06225 (NCTC12699_01241)	purU	1254111..1254947 (+)	837	WP_065245265.1	formyltetrahydrofolate deformylase	-
ELZ63_RS06230 (NCTC12699_01242)	aroA	1254947..1256245 (+)	1299	WP_065245264.1	3-phosphoshikimate 1-carboxyvinyltransferase	-
ELZ63_RS06235 (NCTC12699_01243)	rarA	1256328..1257668 (-)	1341	WP_065245263.1	replication-associated recombination protein A	Machinery gene
ELZ63_RS06240 (NCTC12699_01244)	lolA	1257729..1258346 (-)	618	WP_065245262.1	outer membrane lipoprotein chaperone LolA	-
ELZ63_RS06245 (NCTC12699_01245)	-	1258364..1261093 (-)	2730	WP_065245261.1	DNA translocase FtsK	-
ELZ63_RS06250 (NCTC12699_01246)	lrp	1261095..1261574 (-)	480	WP_005664572.1	leucine-responsive transcriptional regulator Lrp	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 50221.11 Da
• Isoelectric Point: 6.3312

>NTDB_id=998069 ELZ63_RS06235 WP_065245263.1 1256328..1257668(-) (rarA) [Haemophilus influenzae strain NCTC12699]
MSNLNFDFAENDFRPLAAKMRPTSLEQYFGQSHLIGEGKPLRKAIQAGHIHSMILWGPPGTGKTTLAEIIAQRINAEVER
ISAVTSGIKEIREAIDRAKQNRLADRKTILFVDEVHRFNKSQQDAFLPHIEDGTVIFIGATTENPSFELNNALLSRARVY
VLKSLTTAEIEQVLQQAVEDPERGLGKERLILEENLLQVLAEYVNGDARLALNCLELMVDMADEMENGKKIDRTLLKEVL
GERQARFDKQGDRFYDLISALHKSVRGSAPDAALYWYARILTAGGDPLYVARRLLAIASEDVGNADPRAMQVALAAWDCF
TRVGAYEGERAIAQAIIYLAVAPKSNAVYTAFNTAKQQAKDLPDYDVPPHLRNAPTNLMKELGYGAEYRYAHDEPNAYAA
GENYFPPELKDTQYYFPTNRGMEIQIKEKLERLREQDKSAVKKRYK

Nucleotide

• Length: 1341 bp

>NTDB_id=998069 ELZ63_RS06235 WP_065245263.1 1256328..1257668(-) (rarA) [Haemophilus influenzae strain NCTC12699]
ATGTCTAACCTCAATTTTGATTTTGCCGAAAATGATTTTCGCCCACTGGCGGCCAAGATGCGTCCAACGAGTCTAGAACA
ATATTTTGGGCAAAGCCATTTAATTGGCGAGGGCAAGCCACTGCGAAAAGCTATCCAAGCTGGCCATATTCATTCAATGA
TTTTGTGGGGCCCACCAGGTACGGGGAAAACAACCCTTGCAGAAATCATAGCACAACGTATTAATGCGGAAGTAGAGCGA
ATTTCTGCGGTGACGAGTGGTATCAAAGAAATTCGTGAAGCGATTGATCGTGCAAAACAAAATCGTCTTGCGGATCGTAA
AACTATCTTATTTGTGGATGAAGTCCATCGTTTTAATAAAAGCCAGCAAGATGCATTTTTACCGCACATTGAAGACGGAA
CCGTTATTTTTATTGGGGCGACAACAGAAAATCCCTCTTTTGAGCTAAATAATGCATTGCTTTCTCGTGCCCGCGTGTAT
GTGCTGAAATCACTCACAACGGCTGAAATTGAACAAGTTTTGCAGCAAGCTGTAGAAGATCCTGAACGAGGATTGGGTAA
AGAGCGGTTAATTTTAGAAGAGAATTTACTGCAAGTGCTTGCCGAATATGTTAATGGGGATGCGCGATTAGCCTTGAATT
GCCTCGAATTAATGGTGGATATGGCAGATGAAATGGAAAATGGAAAGAAAATTGACCGCACTTTATTAAAAGAAGTCTTA
GGCGAACGTCAAGCGAGATTTGATAAACAAGGTGATCGTTTCTATGATTTAATTTCTGCGCTACATAAATCTGTTCGAGG
TTCTGCTCCAGACGCTGCACTGTATTGGTATGCAAGAATTTTAACGGCAGGTGGCGATCCTTTATATGTCGCGCGCCGAT
TACTTGCCATTGCTTCAGAAGATGTGGGAAATGCAGATCCTCGTGCTATGCAAGTTGCATTGGCTGCTTGGGATTGCTTT
ACTCGAGTGGGGGCTTATGAAGGAGAGCGAGCCATCGCTCAAGCCATTATATATCTCGCAGTAGCGCCAAAAAGTAATGC
GGTTTATACGGCGTTTAACACCGCGAAACAGCAAGCGAAAGATTTGCCAGATTACGATGTTCCACCACATTTACGCAATG
CGCCGACTAATTTAATGAAAGAGCTTGGCTATGGTGCTGAATATCGTTATGCTCACGATGAACCTAACGCTTATGCGGCA
GGCGAAAATTATTTCCCACCTGAATTAAAAGATACTCAATATTATTTTCCGACAAATAGAGGTATGGAAATTCAGATTAA
GGAAAAACTAGAACGATTACGTGAGCAAGATAAAAGTGCGGTGAAAAAACGGTATAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (188-266)

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

• ATPase family associated with various cellular activities (AAA) (AAA) (53-159)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.243	94.843	0.372