Detailed information NTG0998013

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ELZ62_RS06185
• Genome accession: NZ_LR134168
• Coordinates: 1232906..1234246 (+)
• Length: 446 a.a.
• NCBI ID: WP_015702417.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain NCTC11394
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1227906..1239246

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ELZ62_RS06170 (NCTC11394_01224)	lrp	1228961..1229440 (+)	480	WP_126507592.1	leucine-responsive transcriptional regulator Lrp	-
ELZ62_RS06175 (NCTC11394_01225)	-	1229442..1232210 (+)	2769	WP_015702419.1	DNA translocase FtsK	-
ELZ62_RS06180 (NCTC11394_01226)	lolA	1232228..1232845 (+)	618	WP_015702418.1	outer membrane lipoprotein chaperone LolA	-
ELZ62_RS06185 (NCTC11394_01227)	rarA	1232906..1234246 (+)	1341	WP_015702417.1	replication-associated recombination protein A	Machinery gene
ELZ62_RS06190 (NCTC11394_01228)	aroA	1234328..1235626 (-)	1299	WP_015702416.1	3-phosphoshikimate 1-carboxyvinyltransferase	-
ELZ62_RS06195 (NCTC11394_01229)	purU	1235626..1236462 (-)	837	WP_005661478.1	formyltetrahydrofolate deformylase	-
ELZ62_RS06200 (NCTC11394_01230)	-	1236532..1236936 (-)	405	WP_015702415.1	H-NS family nucleoid-associated regulatory protein	-
ELZ62_RS06205 (NCTC11394_01232)	-	1237379..1238899 (+)	1521	WP_015702414.1	Na+/H+ antiporter NhaC family protein	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 50219.01 Da
• Isoelectric Point: 6.3316

>NTDB_id=998013 ELZ62_RS06185 WP_015702417.1 1232906..1234246(+) (rarA) [Haemophilus influenzae strain NCTC11394]
MSNLNFDFAENDFRPLAAKMRPTSLEQYFGQSHLIGEGKPLRKAIQAGHIHSMILWGPPGTGKTTLAEIIAQRINAEVER
ISAVTSGIKEIREAIDRAKQNRLADRKTILFVDEVHRFNKSQQDAFLPHIEDGTVIFIGATTENPSFELNNALLSRARVY
VLKSLTTAEIEQVLQQAVEDPERGLGKERLILEENLLQVLAEYVNGDARLALNCLELVVDMAEETENGKKIDRTLLKEVL
GERQARFDKQGDRFYDLISALHKSVRGSAPDAALYWYARILTAGGDPLYVARRLLAIASEDVGNADPRAMQVALAAWDCF
TRVGAYEGERAIAQAIIYLSVAPKSNAVYTAFNTAKQQAKDLPDYDVPPHLRNAPTNLMKELGYGTEYRYAHDEPNAYAA
GENYFPPELKDTQYYFPTNRGMEIQIKEKLERLREQDKSAVKKRYK

Nucleotide

• Length: 1341 bp

>NTDB_id=998013 ELZ62_RS06185 WP_015702417.1 1232906..1234246(+) (rarA) [Haemophilus influenzae strain NCTC11394]
ATGTCTAACCTCAATTTTGATTTTGCCGAAAATGATTTTCGCCCACTGGCGGCCAAGATGCGTCCAACGAGTCTAGAACA
ATATTTTGGGCAAAGCCATTTAATTGGCGAGGGCAAGCCACTGCGAAAAGCGATTCAAGCTGGGCATATTCATTCTATGA
TTTTGTGGGGACCACCAGGTACGGGGAAAACAACCCTTGCAGAAATCATAGCACAACGTATTAATGCGGAAGTAGAGCGA
ATTTCTGCGGTGACGAGTGGTATCAAAGAAATTCGTGAAGCCATTGATCGTGCAAAACAAAATCGTCTTGCGGATCGTAA
AACTATCTTATTTGTGGATGAAGTCCATCGTTTTAATAAAAGCCAGCAAGATGCATTTTTACCGCACATTGAAGACGGAA
CCGTTATTTTTATTGGGGCGACAACAGAAAATCCCTCTTTTGAGCTAAATAATGCGTTGCTTTCTCGTGCCCGAGTGTAT
GTGCTGAAATCACTCACAACGGCTGAAATTGAACAAGTTTTGCAGCAAGCTGTAGAAGATCCTGAACGTGGATTGGGTAA
AGAGCGGTTAATTTTAGAAGAGAATTTACTGCAAGTACTTGCCGAATATGTTAATGGGGATGCACGATTAGCCTTGAATT
GCCTCGAATTAGTGGTGGATATGGCAGAAGAAACGGAAAATGGAAAGAAAATTGACCGCACTTTATTAAAAGAAGTCTTA
GGTGAACGTCAAGCGAGATTTGATAAACAAGGTGATCGTTTCTATGATTTAATTTCTGCGCTACATAAATCTGTTCGCGG
TTCTGCTCCAGATGCTGCGCTGTATTGGTATGCAAGAATTTTAACAGCGGGTGGAGACCCTTTATATGTTGCGCGCCGAT
TACTTGCCATTGCTTCAGAAGATGTGGGAAATGCAGATCCTCGTGCTATGCAAGTTGCATTGGCTGCTTGGGATTGCTTT
ACTCGAGTGGGGGCTTATGAAGGAGAGCGAGCCATCGCCCAAGCCATTATCTATCTTTCGGTAGCACCAAAAAGTAATGC
CGTTTATACGGCGTTTAACACAGCAAAACAGCAAGCGAAAGATTTACCTGATTACGATGTTCCACCACATTTACGCAATG
CGCCAACTAATTTAATGAAAGAGCTCGGATATGGCACTGAATATCGTTATGCTCACGATGAACCTAACGCTTATGCGGCA
GGCGAAAATTATTTCCCACCTGAATTAAAAGACACTCAATATTATTTTCCGACAAATAGAGGTATGGAAATTCAGATTAA
GGAAAAACTAGAACGGTTACGTGAGCAAGATAAAAGTGCGGTGAAAAAACGGTATAAATAA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (53-159)

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

• AAA C-terminal domain (AAA_assoc_2) (188-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.243	94.843	0.372