Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   ELZ51_RS09700 Genome accession   NZ_LR134094
Coordinates   1912462..1914798 (-) Length   778 a.a.
NCBI ID   WP_126427303.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1907462..1919798
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ51_RS11650 (NCTC4669_02042) - 1907551..1907844 (-) 294 WP_003052683.1 hypothetical protein -
  ELZ51_RS09680 (NCTC4669_02043) mutY 1908011..1909177 (+) 1167 WP_115245695.1 A/G-specific adenine glycosylase -
  ELZ51_RS09685 (NCTC4669_02044) - 1909225..1910418 (-) 1194 Protein_1861 IS3 family transposase -
  ELZ51_RS09690 (NCTC4669_02045) trxA 1910510..1910824 (-) 315 WP_003052691.1 thioredoxin -
  ELZ51_RS09695 (NCTC4669_02046) - 1911051..1912370 (+) 1320 WP_126427301.1 FAD-containing oxidoreductase -
  ELZ51_RS09700 (NCTC4669_02047) mutS/mutS2 1912462..1914798 (-) 2337 WP_126427303.1 endonuclease MutS2 Machinery gene
  ELZ51_RS09705 (NCTC4669_02048) - 1914954..1915499 (-) 546 WP_115253127.1 CvpA family protein -
  ELZ51_RS09710 (NCTC4669_02049) - 1915502..1915810 (-) 309 WP_003052702.1 hypothetical protein -
  ELZ51_RS09715 (NCTC4669_02050) rnhC 1915967..1916875 (+) 909 WP_126427306.1 ribonuclease HIII -
  ELZ51_RS09720 (NCTC4669_02051) lepB 1916887..1917480 (+) 594 WP_003052704.1 signal peptidase I -

Sequence

Protein


Download         Length: 778 a.a.        Molecular weight: 87200.76 Da        Isoelectric Point: 6.8277

>NTDB_id=997775 ELZ51_RS09700 WP_126427303.1 1912462..1914798(-) (mutS/mutS2) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
MDKKILEQLEFDKVKEQFRAYLQTEQGNRELDQLEPLNHHEKIKHYFLEIEEMAGIFVEHHHFALGRLSDISASMRRLEL
EADLSIPELLAVKKILQVSAEASRFYVDLENVQLQALKRLFENLELFPSLQGSLQAINDGGFVESFASPELEKIRRSISD
KEHASRNVLQDLLKKQGDYLSESLIASRNGRSVLPVKNTFRNKVAGVVHDISASGNTVYIEPRALVQLNEELTQLQADER
HEVSRVLQTLSDLIRPHSRVLTNNAWILGHLDFIRAKYLYMRDNKATVPAISDDKSLQLLNVRHPLLQEPVANDLHFSKD
LAVIVITGPNTGGKTITLKTLGLAQLMAQSGLPILADKGSKVAVFSGIFADIGDEQSIEQSLSTFSSHMTHIVAILNQAD
ADSLVLFDELGEGTDPQEGASLAMAILEQLRLTNVKTMATTHYPELKAYGIETPYVENASMEFDSMSLKPTYRFMQGVPG
RSNAFEIARRLGLAEHIVKEAQTMTDTDSDVNRIIEQLEKQTLESRKRLDHIREVEQDNLKFNRAVKKLYNEFSQAKDKE
IEKATLEAREIVDLALAESDSILNQLHDKAALKPHEVIEAKGQLKQLVPEKSLSQNKVLKKAKQLRAPRVGDDIIVTAYG
QRGTLVKELKDKKWEAQVGLIKMTLKEDEFSLVKVVEEAQKPKKKAINVVKKAATGGGPRARLDLRGKRYEEAMQELDAF
IDQALLNNMSQVDIIHGIGTGVIREAVTKYLRRNKHVKSFGYAPQNAGGSGCTIANLG

Nucleotide


Download         Length: 2337 bp        

>NTDB_id=997775 ELZ51_RS09700 WP_126427303.1 1912462..1914798(-) (mutS/mutS2) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
ATGGATAAAAAGATTTTAGAACAGTTAGAATTTGATAAGGTCAAAGAACAATTTCGGGCCTACCTGCAGACAGAGCAGGG
GAACCGTGAATTAGACCAACTCGAACCCCTCAATCATCATGAGAAAATCAAACATTACTTTTTAGAAATTGAAGAAATGG
CTGGCATTTTTGTAGAGCATCATCACTTTGCATTGGGCAGGCTGTCTGACATTTCAGCTAGCATGAGACGTTTGGAACTG
GAAGCTGATTTGAGCATTCCCGAATTATTAGCAGTCAAAAAAATACTTCAGGTATCAGCAGAAGCGAGTCGCTTTTATGT
TGATTTGGAAAACGTTCAGCTGCAAGCCTTGAAGCGTTTATTTGAAAATCTGGAGCTTTTCCCTAGCCTTCAAGGCAGTC
TTCAGGCTATTAATGACGGTGGTTTTGTGGAAAGTTTTGCCAGTCCCGAGTTAGAAAAAATTCGTCGTAGCATCTCAGAC
AAAGAACATGCGAGCCGGAATGTCTTACAAGATTTACTCAAAAAGCAAGGTGACTATTTGTCAGAAAGCTTGATTGCTAG
CCGAAACGGACGTAGTGTCTTACCTGTCAAAAATACCTTCCGTAATAAGGTGGCAGGGGTCGTTCACGATATTTCGGCTT
CAGGAAATACGGTTTATATTGAACCACGAGCTCTTGTTCAACTAAATGAAGAGCTGACGCAGTTACAAGCCGACGAACGT
CATGAAGTGTCACGTGTCCTTCAAACCCTATCAGACCTGATTAGACCTCATAGTCGAGTTCTTACCAATAATGCTTGGAT
TCTGGGGCACCTGGATTTTATCAGAGCCAAATACCTCTATATGAGAGACAATAAGGCCACGGTTCCGGCTATTTCGGATG
ATAAAAGTTTACAGTTGTTAAATGTGCGCCACCCTCTTTTGCAGGAGCCAGTTGCTAATGATTTGCATTTCTCTAAAGAT
TTGGCTGTTATTGTGATTACTGGTCCGAATACTGGTGGTAAAACCATCACGCTAAAAACGCTAGGTTTAGCCCAGCTAAT
GGCCCAATCGGGTCTGCCTATTCTAGCAGATAAAGGTTCCAAAGTTGCTGTTTTTAGTGGTATTTTTGCTGACATTGGCG
ATGAACAATCCATTGAGCAGAGCTTATCAACTTTCTCTAGCCATATGACTCATATTGTTGCTATTTTGAATCAAGCTGAT
GCAGACAGTTTAGTACTCTTTGATGAGCTGGGGGAAGGAACAGATCCGCAAGAAGGAGCAAGTCTTGCTATGGCAATCTT
GGAGCAGTTACGCTTGACTAATGTCAAAACCATGGCGACTACCCATTACCCTGAACTAAAAGCATATGGCATCGAAACTC
CCTATGTGGAAAATGCCAGTATGGAGTTCGATAGCATGAGTTTAAAACCAACTTACCGCTTTATGCAGGGTGTTCCAGGT
CGTTCAAATGCCTTTGAAATTGCTAGACGACTTGGGTTGGCAGAGCACATTGTCAAAGAAGCTCAAACCATGACGGACAC
CGATAGTGATGTTAACCGTATTATCGAACAGTTAGAGAAACAAACTTTGGAGAGTCGTAAGCGGCTTGACCATATTCGAG
AAGTGGAGCAAGATAACCTCAAATTTAACCGTGCGGTCAAAAAATTGTACAATGAGTTCTCACAGGCCAAAGATAAGGAA
ATTGAAAAAGCTACCCTTGAAGCGCGTGAGATTGTAGACTTAGCTTTAGCAGAAAGTGACAGTATTTTAAACCAGTTGCA
TGACAAAGCTGCACTTAAACCTCACGAAGTTATTGAAGCCAAGGGGCAACTCAAACAGTTAGTGCCAGAAAAGAGTCTCT
CTCAAAACAAGGTCCTAAAGAAAGCGAAGCAATTACGAGCTCCTCGAGTAGGAGACGATATTATTGTAACAGCCTATGGC
CAAAGAGGAACCTTGGTAAAAGAACTCAAAGATAAGAAGTGGGAAGCACAAGTTGGACTGATCAAAATGACCCTCAAAGA
AGATGAATTTAGTCTTGTGAAGGTTGTTGAGGAAGCTCAAAAACCAAAGAAAAAAGCTATCAACGTGGTCAAGAAGGCTG
CTACTGGTGGTGGTCCTCGTGCCCGTCTGGATTTGCGTGGCAAACGGTATGAAGAAGCGATGCAAGAACTAGACGCCTTT
ATTGACCAAGCTCTCTTAAATAACATGAGCCAAGTGGATATTATTCATGGGATTGGCACTGGTGTAATCCGTGAAGCTGT
TACCAAATACCTCAGACGAAACAAACATGTTAAAAGCTTTGGTTATGCTCCACAGAATGCGGGTGGATCAGGGTGTACCA
TTGCGAACTTAGGGTGA

Domains

Predicted by InterProScan.

Smr domain (Smr)

(703-776)

MutS domain V (MutS_V)

(324-505)

MutS2 and Smr-associated SH3 domain (MSSS)

(630-669)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

40.38

100

0.41