Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrQ   Type   Regulator
Locus tag   ABC811_RS09385 Genome accession   NZ_CP155535
Coordinates   1818414..1819445 (-) Length   343 a.a.
NCBI ID   WP_000346791.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain PJ755/1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 1813414..1824445
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABC811_RS09335 (ABC811_09335) - 1813560..1814321 (-) 762 WP_001107757.1 SDR family oxidoreductase -
  ABC811_RS09340 (ABC811_09340) ytpR 1814354..1814980 (-) 627 WP_000578316.1 YtpR family tRNA-binding protein -
  ABC811_RS09345 (ABC811_09345) - 1814996..1815313 (-) 318 WP_000615767.1 thioredoxin family protein -
  ABC811_RS09350 (ABC811_09350) - 1815310..1815609 (-) 300 WP_001013974.1 DUF4651 domain-containing protein -
  ABC811_RS09355 (ABC811_09355) - 1815807..1815869 (-) 63 WP_219335539.1 hypothetical protein -
  ABC811_RS09360 (ABC811_09360) - 1815894..1816085 (-) 192 WP_000291826.1 cell wall-binding protein -
  ABC811_RS09365 (ABC811_09365) - 1816246..1816920 (-) 675 WP_000725751.1 membrane protein -
  ABC811_RS09370 (ABC811_09370) - 1816926..1817372 (-) 447 WP_000776589.1 LytTR family DNA-binding domain-containing protein -
  ABC811_RS09375 (ABC811_09375) - 1817474..1817989 (-) 516 WP_000800937.1 phosphatase PAP2 family protein -
  ABC811_RS09380 (ABC811_09380) - 1817986..1818348 (-) 363 WP_000078808.1 DUF2200 family protein -
  ABC811_RS09385 (ABC811_09385) rcrQ 1818414..1819445 (-) 1032 WP_000346791.1 ATP-binding cassette domain-containing protein Regulator
  ABC811_RS09390 (ABC811_09390) rcrP 1819452..1820273 (-) 822 WP_000601689.1 ABC transporter permease Regulator
  ABC811_RS09395 (ABC811_09395) - 1820290..1820760 (-) 471 WP_000360533.1 MarR family winged helix-turn-helix transcriptional regulator -
  ABC811_RS09400 (ABC811_09400) - 1820884..1821600 (-) 717 WP_000532876.1 YebC/PmpR family DNA-binding transcriptional regulator -
  ABC811_RS09405 (ABC811_09405) ply 1822481..1823890 (-) 1410 WP_001284354.1 cholesterol-dependent cytolysin pneumolysin -
  ABC811_RS09410 (ABC811_09410) - 1823901..1824311 (-) 411 WP_000595758.1 hypothetical protein -

Sequence


Protein


Download         Length: 343 a.a.        Molecular weight: 37976.15 Da        Isoelectric Point: 4.3958

>NTDB_id=997345 ABC811_RS09385 WP_000346791.1 1818414..1819445(-) (rcrQ) [Streptococcus pneumoniae strain PJ755/1]
MDFLLMGALFIVLPQTMVSAKRINQVLDLHSSIQNPVQVQLTDENFKGQVEFKDVTFRYAANSEAVIEHVSFKAETGQTV
AFIGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATVHAGQKVAIVGPTGTGKTTIVNLLMKFYEIDKGSIHI
DGVDTKAMTRSEVHDAFSMVLQDTWLFEGTIRDNLIYNQIGISDERMMEASKAVGIHHFIMTLPDGYDTILDDTVTLSVG
QKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGNYEE
LMAQGGFYADLYNSQFTEDEAEE

Nucleotide


Download         Length: 1032 bp        

>NTDB_id=997345 ABC811_RS09385 WP_000346791.1 1818414..1819445(-) (rcrQ) [Streptococcus pneumoniae strain PJ755/1]
ATGGACTTCCTTCTCATGGGAGCACTCTTCATCGTTCTTCCCCAAACTATGGTCTCTGCTAAGCGGATTAATCAAGTTTT
AGATTTGCATTCTTCTATCCAAAACCCTGTTCAAGTGCAGCTGACTGATGAAAACTTCAAAGGTCAGGTCGAGTTTAAGG
ATGTGACCTTCCGCTATGCGGCAAATTCGGAGGCAGTTATTGAACATGTTAGCTTTAAAGCAGAAACTGGTCAAACAGTG
GCCTTTATTGGGTCAACAGGTTCTGGTAAATCAACTCTGGTCAATCTGATTCCACGTTTCTACGACGTGTCAGCAGGAGA
AATTCTGGTGGACGGTGTCAATGTTCAAGACTATGACTTCTCTGCGACAGTTCATGCTGGTCAAAAGGTTGCCATTGTTG
GGCCGACTGGGACTGGTAAGACAACCATTGTCAATCTTTTGATGAAATTCTATGAGATTGATAAGGGAAGTATTCACATT
GATGGTGTGGATACCAAGGCTATGACGCGTTCAGAAGTGCATGATGCCTTTTCAATGGTCTTGCAGGATACCTGGCTCTT
TGAAGGAACTATTCGAGACAATCTCATCTATAATCAAATAGGGATTAGTGATGAACGAATGATGGAAGCTAGTAAGGCTG
TGGGAATTCACCACTTTATTATGACCTTGCCAGATGGCTATGATACCATCTTGGATGACACCGTGACCTTGTCTGTAGGA
CAAAAACAACTATTGACTATTGCTCGTGCCCTTCTTAAGGATGCACCGCTTTTGATTTTGGATGAGGCGACTTCTTCTGT
TGACACACGGACAGAGGAATTGATCCAAAAAGCCATGGACCGTTTGATGGAAGGACGCACATCCTTTGTCATTGCCCACC
GCTTGTCAACCATCCGAAATGCAGACTTGATCTTGGTCATGAAAGATGGAAATATCATCGAGCAAGGCAACTATGAGGAA
CTGATGGCGCAAGGTGGCTTCTACGCTGACTTGTACAATAGTCAATTTACAGAAGATGAAGCAGAAGAATAA

Domains


Predicted by InterproScan.

(120-265)

(68-117)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

80.357

65.306

0.525

  rcrP Streptococcus mutans UA159

37.5

100

0.376


Multiple sequence alignment