Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ABC811_RS01175 Genome accession   NZ_CP155535
Coordinates   207691..208401 (-) Length   236 a.a.
NCBI ID   WP_000760673.1    Uniprot ID   A0A062WVH4
Organism   Streptococcus pneumoniae strain PJ755/1     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 202691..213401
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABC811_RS01150 (ABC811_01150) - 202756..203391 (+) 636 WP_001050430.1 adenylate kinase -
  ABC811_RS01155 (ABC811_01155) - 203637..204590 (+) 954 WP_001155321.1 IS30-like element ISSpn8 family transposase -
  ABC811_RS01160 (ABC811_01160) - 205015..205920 (+) 906 Protein_224 ABC transporter substrate-binding protein -
  ABC811_RS01165 (ABC811_01165) - 205965..206842 (+) 878 Protein_225 ABC transporter permease -
  ABC811_RS01170 (ABC811_01170) - 206855..207658 (+) 804 WP_000157659.1 ATP-binding cassette domain-containing protein -
  ABC811_RS01175 (ABC811_01175) treR 207691..208401 (-) 711 WP_000760673.1 trehalose operon repressor Regulator
  ABC811_RS01180 (ABC811_01180) treP 208586..210553 (+) 1968 WP_000514349.1 PTS system trehalose-specific EIIBC component -
  ABC811_RS01185 (ABC811_01185) treC 210731..212356 (+) 1626 WP_000171233.1 alpha,alpha-phosphotrehalase -
  ABC811_RS01190 (ABC811_01190) - 212498..212746 (+) 249 WP_000364990.1 YneF family protein -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27607.78 Da        Isoelectric Point: 8.9698

>NTDB_id=997304 ABC811_RS01175 WP_000760673.1 207691..208401(-) (treR) [Streptococcus pneumoniae strain PJ755/1]
MKKYQQLFKQIQETIQNETYAVGDFLPSEHDLMEQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVKELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIY
SYIENGLKLLIDYAQKEITIDHSSDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFRFVDFAKRKK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=997304 ABC811_RS01175 WP_000760673.1 207691..208401(-) (treR) [Streptococcus pneumoniae strain PJ755/1]
ATGAAGAAATACCAACAATTATTTAAGCAAATCCAAGAAACCATTCAAAACGAGACTTACGCTGTCGGAGATTTCCTTCC
TAGCGAGCACGACCTTATGGAGCAATATCAAGTGAGTCGTGATACCGTCCGAAAGGCCCTGTCTCTCCTCCAAGAGGAAG
GATTGATCAAAAAGATAAGAGGGCAAGGTTCTCAAGTCGTCAAAGAAGAAACCGTCAATTTCCCTGTATCCAACCTAACC
AGCTACCAAGAACTAGTTAAAGAACTTGGACTGCGCTCTAAAACCAACGTGGTCAGTCTGGACAAGATTATTATTGATAA
AAAATCCTCACTGATAACCGGTTTCCCAGAGTTTCGGATGGTTTGGAAGGTGGTCCGCCAGCGTGTGGTGGATGATCTGG
TATCCGTTCTGGATACGGACTATCTGGATATGGAACTCATCCCAAATCTCACTCGCCAAATTGCTGAGCAGTCTATCTAT
TCTTATATAGAAAATGGCCTCAAACTCCTTATTGATTATGCTCAGAAGGAAATCACCATTGACCACTCAAGCGACCGAGA
CAAGATTCTCATGGACATTGGCAAAGACCCTTATGTCGTTTCGATTAAATCAAAAGTCTATCTCCAAGACGGGCGCCAAT
TTCAGTTTACCGAAAGTCGCCATAAGTTAGAAAAATTTAGATTTGTAGATTTTGCAAAACGCAAGAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A062WVH4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

59.322

100

0.593

Multiple sequence alignment