Detailed information NTG0996280

Bioinformatically predicted

Overview

• Name: comYH
• Type: Machinery gene
• Locus tag: LLNCDO184_RS10840
• Genome accession: NZ_CP155124
• Coordinates: 2113005..2113943 (-)
• Length: 312 a.a.
• NCBI ID: WP_004254589.1
• Uniprot ID: A0A2X0QYG5
• Organism: Lactococcus lactis subsp. lactis strain NCDO184
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2108005..2118943

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLNCDO184_RS10815 (LLNCDO184_10805)	frr	2108123..2108680 (-)	558	WP_004254618.1	ribosome recycling factor	-
LLNCDO184_RS10820 (LLNCDO184_10810)	pyrH	2108892..2109608 (-)	717	WP_004254608.1	UMP kinase	-
LLNCDO184_RS10825 (LLNCDO184_10815)	-	2109693..2110145 (-)	453	WP_010906263.1	hypothetical protein	-
LLNCDO184_RS10830 (LLNCDO184_10820)	-	2110279..2111466 (-)	1188	WP_004254599.1	acetate kinase	-
LLNCDO184_RS10835 (LLNCDO184_10825)	-	2111623..2112810 (-)	1188	WP_004254593.1	acetate kinase	-
LLNCDO184_RS10840 (LLNCDO184_10830)	comYH	2113005..2113943 (-)	939	WP_004254589.1	class I SAM-dependent methyltransferase	Machinery gene
LLNCDO184_RS10845 (LLNCDO184_10835)	-	2114031..2114282 (-)	252	WP_004254583.1	DUF3165 family protein	-
LLNCDO184_RS10850 (LLNCDO184_10840)	typA	2114379..2116211 (-)	1833	WP_025016832.1	translational GTPase TypA	-
LLNCDO184_RS10855 (LLNCDO184_10845)	-	2116399..2116857 (-)	459	WP_063283300.1	hypothetical protein	-
LLNCDO184_RS10860 (LLNCDO184_10850)	-	2116873..2117646 (-)	774	WP_004254570.1	hypothetical protein	-
LLNCDO184_RS10865 (LLNCDO184_10855)	-	2117983..2118609 (-)	627	WP_004254567.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 312 a.a.
• Molecular weight: 34754.93 Da
• Isoelectric Point: 4.4060

>NTDB_id=996280 LLNCDO184_RS10840 WP_004254589.1 2113005..2113943(-) (comYH) [Lactococcus lactis subsp. lactis strain NCDO184]
MDMEKVAQGFELVVANIMLLSEKLGTDFYDAFVEQNAAFLDDTDQGIVELSVNNDKLRQLNLSNKEWQKLFQFVLLKGSQ
VAPLQPNHAMTPDAIGLIFNFIIEHLNKNSELRLIEFGSGMGNLAETLLVNLNKKVDYVGFEVDDLLLDLSASMAEIMGS
QAEFMQIDAVQKRLMEPADVVVSDLPIGFYPDDEVAKNFEVATTDGHTFAHHLLIEQSFNYLKEGSFAIFLAPEDLLTSP
QGPLLKEWISKHGSVMAIITLPKSLFNADAKAIYVLKKGPAAHATFAHPLSSLTDRESLEVFMEEFTKIVKL

Nucleotide

• Length: 939 bp

>NTDB_id=996280 LLNCDO184_RS10840 WP_004254589.1 2113005..2113943(-) (comYH) [Lactococcus lactis subsp. lactis strain NCDO184]
ATGGATATGGAAAAAGTGGCTCAAGGTTTTGAGCTAGTTGTTGCAAATATTATGTTACTATCTGAGAAATTGGGTACAGA
TTTTTATGATGCTTTTGTAGAACAAAATGCTGCTTTTTTAGATGATACTGACCAAGGAATTGTTGAATTGTCAGTAAATA
ATGACAAACTTCGTCAGTTAAATTTATCAAATAAGGAGTGGCAAAAACTTTTTCAATTTGTTTTGTTGAAAGGGTCACAA
GTCGCACCACTTCAGCCCAATCATGCAATGACTCCAGATGCAATTGGTTTAATTTTTAATTTCATTATTGAACATCTTAA
TAAAAATTCTGAACTTCGTTTAATTGAATTTGGGTCTGGCATGGGTAATCTTGCTGAAACGCTTTTAGTTAATCTTAATA
AAAAGGTTGATTATGTAGGCTTTGAAGTTGATGATTTACTTTTAGATTTGTCTGCTTCAATGGCTGAAATTATGGGGAGT
CAGGCTGAGTTCATGCAAATTGATGCAGTACAAAAGCGTTTGATGGAACCTGCAGACGTTGTTGTCAGTGATTTACCAAT
TGGTTTTTATCCGGATGATGAAGTTGCAAAGAATTTTGAAGTTGCGACTACTGACGGACATACTTTTGCTCATCATCTTT
TGATTGAGCAATCATTTAATTATTTAAAAGAGGGTTCTTTTGCCATTTTCCTAGCTCCAGAAGATTTACTGACAAGTCCT
CAAGGACCACTATTAAAGGAGTGGATTAGTAAACATGGAAGTGTGATGGCTATCATCACTTTACCAAAATCACTTTTTAA
TGCTGATGCTAAGGCGATTTATGTTTTGAAAAAGGGGCCGGCTGCACATGCAACTTTTGCTCACCCTTTGTCTTCACTGA
CAGACAGAGAAAGTTTAGAAGTCTTTATGGAAGAATTTACAAAAATTGTAAAATTATAA

Domains

No domain identified.

3D structure

• AlphaFold DB: A0A2X0QYG5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYH	Streptococcus mutans UA140	48.562	100	0.487
comYH	Streptococcus mutans UA159	48.243	100	0.484