Detailed information NTG0995835

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: AAHT64_RS06595
• Genome accession: NZ_CP155054
• Coordinates: 1299321..1301717 (+)
• Length: 798 a.a.
• NCBI ID: WP_003229776.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain R38
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1294321..1306717

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAHT64_RS06570 (AAHT64_06570)	rarA	1294403..1295668 (-)	1266	WP_019712521.1	replication-associated recombination protein A	-
AAHT64_RS06575 (AAHT64_06575)	cymR	1295870..1296286 (+)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
AAHT64_RS06580 (AAHT64_06580)	iscSA	1296305..1297447 (+)	1143	WP_003229769.1	cysteine desulfurase family protein	-
AAHT64_RS06585 (AAHT64_06585)	mnmA	1297475..1298590 (+)	1116	WP_032677111.1	tRNA 2-thiouridine(34) synthase MnmA	-
AAHT64_RS06590 (AAHT64_06590)	yrrB	1298676..1299296 (+)	621	WP_237957762.1	tetratricopeptide repeat protein	-
AAHT64_RS06595 (AAHT64_06595)	recD2	1299321..1301717 (+)	2397	WP_003229776.1	ATP-dependent RecD-like DNA helicase	Machinery gene
AAHT64_RS06600 (AAHT64_06600)	-	1301773..1302297 (+)	525	WP_080010572.1	hypothetical protein	-
AAHT64_RS06605 (AAHT64_06605)	-	1302309..1302500 (+)	192	WP_003225893.1	hypothetical protein	-
AAHT64_RS06610 (AAHT64_06610)	yrzQ	1302522..1302653 (+)	132	WP_003229780.1	YrzQ family protein	-
AAHT64_RS06615 (AAHT64_06615)	glnP	1302688..1303344 (-)	657	WP_003229784.1	amino acid ABC transporter permease	-
AAHT64_RS06620 (AAHT64_06620)	glnM	1303361..1304011 (-)	651	WP_004398664.1	amino acid ABC transporter permease	-
AAHT64_RS06625 (AAHT64_06625)	glnH	1304072..1304893 (-)	822	WP_003229788.1	glutamine ABC transporter substrate-binding protein GlnH	-
AAHT64_RS06630 (AAHT64_06630)	glnQ	1304914..1305642 (-)	729	WP_003229790.1	amino acid ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 89183.74 Da
• Isoelectric Point: 5.0291

>NTDB_id=995835 AAHT64_RS06595 WP_003229776.1 1299321..1301717(+) (recD2) [Bacillus subtilis subsp. subtilis strain R38]
MQQHPDQLKLEEEPYLKGTVNTVIYHNDTNLYTVLKVKVTETSEAIEDKAVSVTGYFPALQEEETYTFYGKIVTHPKFGL
QFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKKLGDSAINKILADASVLYDVPRLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFGKADELGSRMGLSGNHPERVKAAILYTLETT
CLSEGHTYIETEQLIIDTQSLLNQSAREGQRITEMDAANAIIALGENKDIVIEDGRCYFPSLFYAEQNVAKRVKHIASQT
EYENQFPESEFLLALGELEERMDVQYAPSQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYGELHGVSLDPSAYKKD
EAFPIVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTEDQPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQI
IIVGDEDQLPSVGPGQVLRDLLTSQVIPTVRLTDIYRQAEGSSIVELAHQMKNGLLPNNLTAPTKDRSFIRCGGSQIKEV
VEKVVANALKKGYTAKDIQVLAPMYRGKAGINELNVMLQDILNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGD
IGEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFNQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAIT
RAKKFLILCGEEEALEWGVKNNDAAVRQTSLKNRLSVQVEEMDAELEALQKELPFSVHDANIGMEGITPFDFMKEEQQ

Nucleotide

• Length: 2397 bp

>NTDB_id=995835 AAHT64_RS06595 WP_003229776.1 1299321..1301717(+) (recD2) [Bacillus subtilis subsp. subtilis strain R38]
GTGCAGCAGCATCCGGATCAGCTTAAACTGGAGGAAGAGCCCTATTTAAAAGGGACAGTCAACACAGTCATCTATCATAA
TGACACCAATTTATATACGGTTCTGAAAGTGAAAGTCACAGAGACCTCCGAAGCCATTGAAGATAAAGCCGTATCCGTGA
CGGGCTACTTCCCTGCGCTTCAAGAAGAAGAGACCTACACGTTTTACGGAAAGATCGTAACCCATCCAAAATTCGGGCTC
CAATTTCAGGCGGAGCATTTCAAAAAGGAGATTCCAACGACTAAGGAAGGCATCATTCAATATTTATCGAGTGATTTATT
CGAGGGGATCGGCAAAAAAACAGCTGAAGAAATTGTGAAAAAGCTGGGCGACAGCGCCATTAATAAAATATTGGCTGATG
CTTCAGTGCTTTATGATGTTCCCAGACTCTCAAAAAAGAAAGCAGACACGCTGGCTGGCGCATTGCAGCGGCATCAGGGA
CTGGAGCAAATCATGATTTCCTTGAATCAGTTTGGCTTTGGCCCGCAGCTGTCTATGAAAATCTATCAAGCCTATGAATC
CGAGACGCTTGAAAAGATTCAGGAAAATCCTTATCAGCTTGTGAAGGATGTAGAAGGCATCGGGTTTGGAAAAGCGGATG
AGCTGGGCAGCAGAATGGGTCTTTCGGGTAATCATCCTGAGCGGGTAAAAGCTGCTATTTTGTACACGCTTGAAACGACT
TGTCTGTCAGAGGGGCACACGTACATAGAAACGGAACAGCTGATCATTGACACCCAATCTCTGTTAAACCAGTCAGCAAG
GGAAGGACAGCGCATCACAGAAATGGATGCCGCTAACGCAATTATTGCCCTTGGAGAAAATAAAGACATTGTCATAGAAG
ATGGCCGCTGTTATTTTCCTTCGCTGTTTTACGCAGAACAAAACGTTGCAAAGCGTGTAAAACATATCGCTAGCCAAACC
GAATATGAGAACCAGTTTCCCGAATCAGAGTTTTTGCTCGCGTTGGGAGAACTGGAAGAACGGATGGACGTTCAGTATGC
CCCCAGCCAGAAGGAAGCGATTCAAAAAGCCCTTTCCTCGCCGATGCTTCTTTTAACAGGCGGCCCGGGAACAGGAAAAA
CGACGGTAATTAGAGGGATTGTCGAGCTCTACGGAGAGCTTCACGGTGTGTCACTAGACCCGTCAGCTTATAAAAAGGAT
GAAGCTTTTCCGATTGTTTTGGCCGCTCCGACAGGGAGAGCAGCAAAACGGATGAGTGAATCAACGGGACTTCCTGCAGT
CACGATACACAGGCTGCTTGGCTGGAACGGTGCTGAAGGCTTTACTCATACAGAGGATCAGCCGATCGAAGGGAAGCTGT
TAATTATCGATGAAGCCAGTATGCTTGATATATGGCTGGCGAATCATTTGTTCAAGGCGATCCCTGATCATATACAAATC
ATCATTGTCGGAGACGAAGACCAGCTGCCTTCCGTCGGTCCGGGACAAGTGCTCAGAGACCTGCTGACATCCCAGGTGAT
TCCGACTGTGAGACTGACAGACATCTATCGTCAGGCGGAGGGGTCATCAATCGTCGAGCTTGCCCACCAGATGAAAAATG
GATTGCTGCCGAACAATTTGACTGCCCCGACAAAGGACCGTTCCTTTATTCGCTGCGGCGGGTCGCAAATCAAAGAAGTA
GTTGAGAAGGTTGTCGCCAATGCATTGAAAAAAGGCTATACAGCAAAGGACATTCAGGTCCTCGCTCCGATGTACAGAGG
AAAAGCCGGCATTAATGAATTGAATGTGATGCTGCAGGACATTTTAAATCCTCCTAAAGAAAAACGGAGAGAATTGAAGT
TCGGGGATGTTGTCTACAGAACCGGAGATAAAATTTTGCAGCTTGTCAATCAGCCGGAAAACAATGTGTTCAACGGAGAT
ATTGGCGAAATCACGTCGATATTTTATGCAAAGGAAAATACAGAAAAAGAAGACATGGCCGTCGTTTCTTTTGACGGCAA
TGAAATGACATTTACGAAAAAAGATTTTAATCAATTTACCCATGCGTATTGCTGTTCTATTCATAAATCGCAGGGAAGTG
AATTTCCGATTGTGGTTTTGCCTGTTGTGAAAGGCTATTATAGAATGCTCAGAAGAAACCTTCTTTATACCGCGATTACA
AGAGCGAAGAAATTTCTCATTTTATGCGGTGAGGAGGAGGCGCTGGAGTGGGGCGTGAAAAATAATGATGCAGCTGTCAG
ACAGACCTCCTTGAAAAACAGGCTGTCCGTACAGGTTGAGGAAATGGATGCCGAGCTTGAGGCTCTCCAAAAAGAGCTCC
CGTTCAGCGTACACGACGCTAACATTGGCATGGAAGGCATTACACCATTCGATTTTATGAAAGAAGAACAGCAATAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (346-553)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-662)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (681-729)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	99.749	100	0.997