Detailed information NTG0995075

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: AAVC94_RS12195
• Genome accession: NZ_CP154906
• Coordinates: 2387075..2389459 (-)
• Length: 794 a.a.
• NCBI ID: WP_342500294.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain FUA2115
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2382075..2394459

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAVC94_RS12160 (AAVC94_12160)	-	2383138..2383866 (+)	729	WP_050943677.1	amino acid ABC transporter ATP-binding protein	-
AAVC94_RS12165 (AAVC94_12165)	-	2383880..2384689 (+)	810	WP_050943676.1	transporter substrate-binding domain-containing protein	-
AAVC94_RS12170 (AAVC94_12170)	-	2384769..2385422 (+)	654	WP_137054915.1	amino acid ABC transporter permease	-
AAVC94_RS12175 (AAVC94_12175)	-	2385438..2386088 (+)	651	WP_003216394.1	amino acid ABC transporter permease	-
AAVC94_RS12180 (AAVC94_12180)	-	2386124..2386255 (-)	132	WP_003216198.1	YrzQ family protein	-
AAVC94_RS12185 (AAVC94_12185)	-	2386276..2386467 (-)	192	WP_003216308.1	hypothetical protein	-
AAVC94_RS12190 (AAVC94_12190)	-	2386481..2386999 (-)	519	WP_003216813.1	hypothetical protein	-
AAVC94_RS12195 (AAVC94_12195)	recD2	2387075..2389459 (-)	2385	WP_342500294.1	ATP-dependent RecD-like DNA helicase	Machinery gene
AAVC94_RS12200 (AAVC94_12200)	-	2389479..2390132 (-)	654	WP_003216571.1	tetratricopeptide repeat protein	-
AAVC94_RS12205 (AAVC94_12205)	mnmA	2390193..2391311 (-)	1119	WP_345808569.1	tRNA 2-thiouridine(34) synthase MnmA	-
AAVC94_RS12210 (AAVC94_12210)	-	2391407..2392549 (-)	1143	WP_253622383.1	cysteine desulfurase family protein	-
AAVC94_RS12215 (AAVC94_12215)	-	2392568..2392987 (-)	420	WP_034620651.1	Rrf2 family transcriptional regulator	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89045.58 Da
• Isoelectric Point: 5.1580

>NTDB_id=995075 AAVC94_RS12195 WP_342500294.1 2387075..2389459(-) (recD2) [Bacillus pumilus strain FUA2115]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGQLGSQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNEYKVTEMDVANQIIALGEGKEMIIEDERCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASQAVPAVTLTDIYRQADGSSIVELAHDMKNGVLPKDITARSKDRSFIKCSVDQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEEVMDAELAALQKELPFSVHDANIGMEGITPFDFMYE

Nucleotide

• Length: 2385 bp

>NTDB_id=995075 AAVC94_RS12195 WP_342500294.1 2387075..2389459(-) (recD2) [Bacillus pumilus strain FUA2115]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCATTTTTAAAGGGGACAGTTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTGAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAAGAAACTTACACCTTCTATGGCAAAGTCACAAGCCACCCGAAATTTGGTGAA
CAGTTTCAGGCAACTCATTTTCAAAAGGAAGTACCGACAACAAAGCAAGGAATCATCCATTATCTTTCAAGTGATTTATT
TGAGGGGATAGGCAAAAAGACGGCGGAAGAAATTGTAGGGCAGCTTGGCAGTCAGACGCTTCATAAAATAATGCGTGACC
CAGCGGTTTTGTATGACGTTCCGCGTTTATCAAAAAAGAAGGCAGATAAGCTGGCCGCAGCGCTCCAGGAGCATCAAGGA
TTGGAACAAATTATGATCAGCCTGAATCAATATGGCTTTGGTCCACAGCTCAGCATGAAGATATATCAAGTGTACGAGAG
TGAGACGCTGCAGAAGATTGAAGAAAACCCTTATCAGCTCGTCAAGGATGTCGAAGGAATCGGATTTATTAAGGCGGATG
AACTTGGCGCTAGAACCGGTATCTCAGGAAATGACCCAGAGCGAATCCGTGCAGCCTTGCTTTATACAGTGGAGACAGCC
AGCCTTCAGGACGGTCATACGTACATACAAACAAAGGATTTGATCGTCGAAACCCGAAAACTGCTCAATCAGACAGGCAA
TGAGTACAAAGTGACGGAAATGGACGTCGCCAATCAGATCATTGCACTTGGCGAAGGGAAAGAGATGATCATTGAAGATG
AGCGCTGCTATCATCCGTCCTTATTTTATGCCGAGCAAAGTGTCGCCAAACGTATACAAAAAATCGTCTCCCAAACGGAA
TATGCAGACCAATTCCCTGAATCAGAATTCCTTCTAGCCCTTGGTGAGCTAGAGGAACGGCTGGGCGTCCAGTATGCACC
GACACAAAAAGAAGCGATTCAAAAGGCGCTCATGTCCCCAATGCTGCTTTTAACAGGCGGACCTGGGACTGGGAAGACAA
CAGTCATTAAAGGGATTGTTGAGCTTTACAGCGATCTTCACGGTGTATCTCTTGATCCGAGTGATTACAAAAAAGATGAA
TCCTTTCCATTTGTGCTTGCGGCGCCAACTGGACGAGCAGCTAAACGAATGACAGAATCAACAGGGCTTCCAGCTGTGAC
GATTCACCGGCTGCTTGGTTGGAATGGGTCAGAGGGATTCTCGCATGATGAAGAACAGCCGATTGAAGGAAAGCTTGTCA
TTATTGATGAATCAAGCATGCTAGATATTTGGCTTGCGAATCACTTGTTTAAGGCCATTCCTGATCATATCCAAGTGATC
ATGGTGGGGGATGAACATCAGCTTCCGTCTGTCGGACCAGGCCAAGTGTTAAGAGACTTGCTTGCATCACAAGCTGTGCC
AGCTGTTACCCTGACAGATATTTACCGTCAGGCAGACGGCTCCAGCATTGTTGAGCTTGCACATGATATGAAAAATGGCG
TCCTGCCAAAGGATATTACCGCACGTTCAAAGGATCGATCTTTCATAAAATGCTCAGTTGATCAAATGAAAGAAGTGATT
GAGAAAGTCGTCAGCAATGCTGCTCAAAAAGGCTATTCAGCTAAAGACATTCAAGTGCTTGCGCCCATGTATAAAGGAAA
AGCAGGCATTAATGAGCTCAATAAAATGCTGCAGCACATTTTAAATCCTAAAAAACCAAAAGGCAGAGAAATCCCGTTTG
GTGATGTGGTGTACCGGACCGGTGATAAAGTGCTTCAGCTTGTGAATCAGCCGGAGAACAATATTTTTAACGGTGATATT
GGCGAAATTGTCTCGATTTTTTATGCGAAAGAAAACACGGAAAAAGAAGACATGGCTGTGATCTCCTTTGATGGGAATGA
AATTACCTTTACAAAAAAGGATTTTCATCAATTTACACATGCCTATTGCTGCTCCATCCACAAATCACAAGGCAGTGAAT
TCCCCATCGTTGTGCTTCCAGTCGTGAGAAGCTACTACAGAATGCTTCGGCGAAATCTGCTGTACACAGCCATTACACGA
AGTAAAAAGTTTTTAATTCTGTGCGGCGAGGAATCAGCACTGGAGTGGGGCGTGAAAAACAATGAGGATTCGCTCAGACA
AACGTCCTTAACGATGCGGCTCGTGCAAACCGAAGAGGTTATGGATGCGGAACTTGCAGCACTTCAAAAAGAACTGCCGT
TTAGCGTGCATGATGCAAATATCGGTATGGAGGGAATCACTCCATTTGATTTTATGTATGAATAA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• AAA domain (AAA_30) (345-552)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	80.276	100	0.805