Detailed information NTG0994970

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: AAVC22_RS01660
• Genome accession: NZ_CP154902
• Coordinates: 343150..343929 (-)
• Length: 259 a.a.
• NCBI ID: WP_003181756.1
• Uniprot ID: A0A1Y0YKK2
• Organism: Bacillus paralicheniformis strain FUA2150
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 338150..348929

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAVC22_RS01630 (AAVC22_01630)	fliH	338193..338960 (-)	768	WP_020451392.1	flagellar assembly protein FliH	-
AAVC22_RS01635 (AAVC22_01635)	fliG	338944..339960 (-)	1017	WP_020451391.1	flagellar motor switch protein FliG	-
AAVC22_RS01640 (AAVC22_01640)	fliF	339974..341575 (-)	1602	WP_020451390.1	flagellar basal-body MS-ring/collar protein FliF	-
AAVC22_RS01645 (AAVC22_01645)	fliE	341626..341943 (-)	318	WP_020451389.1	flagellar hook-basal body complex protein FliE	-
AAVC22_RS01650 (AAVC22_01650)	flgC	341957..342409 (-)	453	WP_025811385.1	flagellar basal body rod protein FlgC	-
AAVC22_RS01655 (AAVC22_01655)	flgB	342409..342798 (-)	390	WP_020451387.1	flagellar basal body rod protein FlgB	-
AAVC22_RS01660 (AAVC22_01660)	codY	343150..343929 (-)	780	WP_003181756.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
AAVC22_RS01665 (AAVC22_01665)	hslU	343968..345371 (-)	1404	WP_025811384.1	HslU--HslV peptidase ATPase subunit	-
AAVC22_RS01670 (AAVC22_01670)	hslV	345388..345933 (-)	546	WP_020451384.1	ATP-dependent protease subunit HslV	-
AAVC22_RS01675 (AAVC22_01675)	xerC	345947..346861 (-)	915	WP_025811383.1	tyrosine recombinase XerC	-
AAVC22_RS01680 (AAVC22_01680)	trmFO	346928..348232 (-)	1305	WP_025811382.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-

Sequence

Protein

• Length: 259 a.a.
• Molecular weight: 29073.42 Da
• Isoelectric Point: 4.8196

>NTDB_id=994970 AAVC22_RS01660 WP_003181756.1 343150..343929(-) (codY) [Bacillus paralicheniformis strain FUA2150]
MALLQKTRKINAMLQNAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGFSINQQIENDRMKKMLEERQFPEDYTKSLF
NIPETSSNLDINSEYTAFPVENRDLFQAGLTTVVPIIGGGERLGTLILSRLQEKFEDDDLILAEYGATVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNNKFLMELEKLKSH

Nucleotide

• Length: 780 bp

>NTDB_id=994970 AAVC22_RS01660 WP_003181756.1 343150..343929(-) (codY) [Bacillus paralicheniformis strain FUA2150]
ATGGCTTTATTACAAAAAACAAGAAAGATTAATGCAATGCTGCAAAATGCGGCAGGGAAGCCGGTTAATTTTAAAGAAAT
GGCCGAAACGCTTCGCGATGTGATTGATTCGAACATTTTCGTTGTCAGCCGCAGAGGAAAGCTTCTCGGTTTCTCGATCA
ACCAGCAGATCGAAAATGACCGGATGAAAAAAATGCTTGAAGAGCGCCAGTTTCCTGAAGACTATACAAAAAGCCTGTTC
AACATTCCGGAAACTTCATCCAACCTTGACATTAACAGCGAATATACGGCTTTCCCTGTGGAAAACCGCGATTTGTTCCA
AGCGGGTCTGACCACAGTCGTTCCGATCATCGGAGGGGGCGAAAGACTCGGCACCTTGATTCTGTCCCGCCTTCAGGAGA
AATTCGAGGATGACGATCTGATCCTTGCTGAATATGGCGCAACGGTCGTAGGAATGGAAATTCTCAGAGAGAAAGCTGAA
GAGATCGAAGAGGAAGCACGCAGCAAAGCGGTCGTTCAAATGGCGATCAGTTCATTATCTTACAGTGAGCTTGAAGCAAT
TGAACATATTTTTGAAGAGCTTGACGGAAATGAAGGTCTGCTTGTCGCAAGTAAAATTGCAGACCGCGTCGGCATCACCC
GCTCGGTCATTGTCAATGCGCTGCGCAAACTTGAAAGCGCCGGTGTCATTGAATCAAGGTCATTAGGGATGAAAGGCACA
TACATTAAAGTCCTGAACAACAAATTTTTAATGGAATTAGAAAAACTAAAGTCTCATTAA

Domains

Predicted by InterproScan.

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

• CodY GAF-like domain (CodY) (3-178)

3D structure

• AlphaFold DB: A0A1Y0YKK2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	94.595	100	0.946
codY	Lactococcus lactis subsp. lactis strain DGCC12653	47.451	98.456	0.467