Detailed information NTG0994944

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: AAYR26_RS17190
• Genome accession: NZ_CP154901
• Coordinates: 3190644..3191423 (-)
• Length: 259 a.a.
• NCBI ID: WP_003181756.1
• Uniprot ID: A0A1Y0YKK2
• Organism: Bacillus licheniformis strain FUA2146
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 3185644..3196423

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAYR26_RS17160 (AAYR26_17165)	fliH	3185685..3186452 (-)	768	WP_009328518.1	flagellar assembly protein FliH	-
AAYR26_RS17165 (AAYR26_17170)	fliG	3186436..3187452 (-)	1017	WP_003181768.1	flagellar motor switch protein FliG	-
AAYR26_RS17170 (AAYR26_17175)	fliF	3187466..3189067 (-)	1602	WP_003181766.1	flagellar basal-body MS-ring/collar protein FliF	-
AAYR26_RS17175 (AAYR26_17180)	fliE	3189118..3189435 (-)	318	WP_003181764.1	flagellar hook-basal body complex protein FliE	-
AAYR26_RS17180 (AAYR26_17185)	flgC	3189449..3189901 (-)	453	WP_009328519.1	flagellar basal body rod protein FlgC	-
AAYR26_RS17185 (AAYR26_17190)	flgB	3189901..3190290 (-)	390	WP_003181758.1	flagellar basal body rod protein FlgB	-
AAYR26_RS17190 (AAYR26_17195)	codY	3190644..3191423 (-)	780	WP_003181756.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
AAYR26_RS17195 (AAYR26_17200)	hslU	3191462..3192874 (-)	1413	WP_254926368.1	HslU--HslV peptidase ATPase subunit	-
AAYR26_RS17200 (AAYR26_17205)	hslV	3192882..3193427 (-)	546	WP_003181752.1	ATP-dependent protease subunit HslV	-
AAYR26_RS17205 (AAYR26_17210)	xerC	3193441..3194355 (-)	915	WP_011197974.1	tyrosine recombinase XerC	-
AAYR26_RS17210 (AAYR26_17215)	trmFO	3194422..3195726 (-)	1305	WP_003181748.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-

Sequence

Protein

• Length: 259 a.a.
• Molecular weight: 29073.42 Da
• Isoelectric Point: 4.8196

>NTDB_id=994944 AAYR26_RS17190 WP_003181756.1 3190644..3191423(-) (codY) [Bacillus licheniformis strain FUA2146]
MALLQKTRKINAMLQNAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGFSINQQIENDRMKKMLEERQFPEDYTKSLF
NIPETSSNLDINSEYTAFPVENRDLFQAGLTTVVPIIGGGERLGTLILSRLQEKFEDDDLILAEYGATVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNNKFLMELEKLKSH

Nucleotide

• Length: 780 bp

>NTDB_id=994944 AAYR26_RS17190 WP_003181756.1 3190644..3191423(-) (codY) [Bacillus licheniformis strain FUA2146]
ATGGCTTTATTACAAAAAACAAGAAAGATTAATGCAATGCTGCAAAATGCGGCAGGGAAGCCGGTTAATTTTAAAGAAAT
GGCCGAAACGCTTCGCGATGTGATTGATTCGAACATTTTCGTCGTCAGCCGCAGAGGAAAGCTTCTCGGTTTCTCGATCA
ACCAGCAGATCGAAAATGACCGGATGAAAAAAATGCTTGAAGAGCGCCAGTTTCCTGAAGATTATACAAAAAGCCTGTTC
AACATTCCGGAAACGTCATCTAACCTTGACATCAACAGCGAATACACAGCTTTCCCTGTGGAAAACCGCGATTTGTTCCA
AGCGGGTCTGACCACGGTCGTTCCGATCATCGGAGGAGGCGAAAGACTGGGCACCTTGATTCTGTCCCGCCTTCAGGAGA
AATTCGAGGATGACGATCTGATCCTTGCCGAATATGGCGCCACTGTCGTAGGAATGGAAATTCTCAGAGAGAAAGCGGAA
GAGATCGAAGAGGAAGCGCGCAGCAAAGCGGTCGTTCAAATGGCGATCAGTTCACTATCTTACAGCGAGCTTGAAGCAAT
TGAACATATTTTTGAGGAGCTTGACGGAAATGAAGGCCTGCTTGTCGCTAGTAAAATTGCAGACCGCGTCGGCATCACCC
GCTCGGTCATTGTCAACGCGCTCCGTAAACTTGAAAGCGCCGGTGTCATTGAATCAAGGTCACTAGGGATGAAAGGCACA
TACATCAAAGTGCTGAACAACAAATTTTTGATGGAGTTAGAAAAACTAAAGTCTCATTAA

Domains

Predicted by InterproScan.

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

• CodY GAF-like domain (CodY) (3-178)

3D structure

• AlphaFold DB: A0A1Y0YKK2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	94.595	100	0.946
codY	Lactococcus lactis subsp. lactis strain DGCC12653	47.451	98.456	0.467