Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   AAYT22_RS08595 Genome accession   NZ_CP154876
Coordinates   1670561..1671382 (-) Length   273 a.a.
NCBI ID   WP_000601682.1    Uniprot ID   A0A4K3G7N8
Organism   Streptococcus pneumoniae strain 20155336     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 1665561..1676382
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAYT22_RS08550 (AAYT22_08540) - 1666105..1666422 (-) 318 WP_000615767.1 thioredoxin family protein -
  AAYT22_RS08555 (AAYT22_08545) - 1666419..1666718 (-) 300 WP_001013974.1 DUF4651 domain-containing protein -
  AAYT22_RS08560 (AAYT22_08550) - 1666916..1666978 (-) 63 WP_219300018.1 hypothetical protein -
  AAYT22_RS08565 (AAYT22_08555) - 1667003..1667194 (-) 192 WP_000291825.1 cell wall-binding protein -
  AAYT22_RS08570 (AAYT22_08560) - 1667355..1668029 (-) 675 WP_000725751.1 LiaF transmembrane domain-containing protein -
  AAYT22_RS08575 (AAYT22_08565) - 1668035..1668481 (-) 447 WP_000776594.1 LytTR family DNA-binding domain-containing protein -
  AAYT22_RS08580 (AAYT22_08570) - 1668595..1669098 (-) 504 WP_000800928.1 phosphatase PAP2 family protein -
  AAYT22_RS08585 (AAYT22_08575) - 1669095..1669457 (-) 363 WP_000078805.1 DUF2200 domain-containing protein -
  AAYT22_RS08590 (AAYT22_08580) - 1669523..1670368 (-) 846 Protein_1678 ATP-binding cassette domain-containing protein -
  AAYT22_RS08595 (AAYT22_08585) rcrP 1670561..1671382 (-) 822 WP_000601682.1 ABC transporter permease Regulator
  AAYT22_RS08600 (AAYT22_08590) - 1671399..1671870 (-) 472 Protein_1680 MarR family winged helix-turn-helix transcriptional regulator -
  AAYT22_RS08605 (AAYT22_08595) - 1671994..1672710 (-) 717 WP_000532876.1 YebC/PmpR family DNA-binding transcriptional regulator -
  AAYT22_RS08610 (AAYT22_08600) ply 1673591..1675006 (-) 1416 WP_001284361.1 cholesterol-dependent cytolysin pneumolysin -
  AAYT22_RS08615 (AAYT22_08605) - 1675017..1675427 (-) 411 WP_000595757.1 hypothetical protein -
  AAYT22_RS08620 (AAYT22_08610) - 1675420..1676028 (-) 609 WP_000083614.1 hypothetical protein -

Sequence


Protein


Download         Length: 273 a.a.        Molecular weight: 30604.17 Da        Isoelectric Point: 5.9310

>NTDB_id=994391 AAYT22_RS08595 WP_000601682.1 1670561..1671382(-) (rcrP) [Streptococcus pneumoniae strain 20155336]
MILLAILFTCFSVYLELEVPTYISKITDLLGSQETNLDELWQPASMMMGMSFLAFLSVVAVGFFASRVAASYTSRLRSDI
FNRVLDYSQTEIKKFSIPSLLTRTTNDITQVQMLITMGLQVVTRGSIMAIWAIGKILGHSEYWLWAVLVVVIVNVLMTTV
LMTLAFPKQSLIQGLTDKLNSITRESLTGIRVVRAYNAEDYQNEKFAAVNDELTRLNLFVNRLMAILNPIMMGISSGLSV
AIYWIGAYVINDAAPIARLPLFSDMIIFMSYAM

Nucleotide


Download         Length: 822 bp        

>NTDB_id=994391 AAYT22_RS08595 WP_000601682.1 1670561..1671382(-) (rcrP) [Streptococcus pneumoniae strain 20155336]
ATGATTTTACTAGCCATTCTCTTTACTTGCTTTTCGGTCTATCTAGAGTTGGAAGTGCCGACCTATATCTCGAAAATTAC
GGATTTGCTAGGTAGTCAAGAAACTAATTTAGATGAGTTGTGGCAGCCGGCAAGCATGATGATGGGAATGTCCTTTCTTG
CCTTCTTGTCCGTAGTTGCAGTTGGATTTTTTGCATCCCGAGTGGCGGCTTCTTATACTAGTAGGCTGAGAAGTGATATT
TTTAACCGAGTTTTGGATTACTCGCAGACAGAGATTAAGAAATTTTCAATTCCTAGCCTCTTGACGCGTACTACCAATGA
CATTACTCAAGTTCAAATGTTGATTACTATGGGCTTGCAAGTGGTAACGCGTGGTTCAATTATGGCTATCTGGGCTATTG
GGAAGATTTTAGGTCATTCAGAATACTGGCTCTGGGCCGTACTTGTGGTAGTGATTGTCAACGTCCTGATGACGACCGTT
TTGATGACGCTAGCCTTTCCAAAACAGTCCTTGATTCAGGGGTTGACAGATAAACTGAACAGTATCACTCGTGAGAGTTT
AACAGGTATTCGTGTCGTTCGTGCCTACAATGCAGAGGATTATCAAAATGAAAAATTTGCAGCAGTAAATGATGAATTGA
CCCGTTTGAATTTGTTTGTCAACCGTCTTATGGCTATTTTGAATCCTATCATGATGGGGATTTCAAGTGGTTTGAGTGTA
GCGATTTACTGGATTGGGGCCTATGTGATTAACGACGCTGCTCCGATAGCGCGTCTGCCTCTCTTTAGTGACATGATTAT
TTTCATGTCTTATGCCATGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4K3G7N8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

56.842

100

0.593


Multiple sequence alignment