Detailed information NTG0993470

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: AAHT65_RS20695
• Genome accession: NZ_CP154443
• Coordinates: 4094226..4096619 (-)
• Length: 797 a.a.
• NCBI ID: WP_343310755.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain SW
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4089226..4101619

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAHT65_RS20660 (AAHT65_20655)	-	4090283..4091011 (+)	729	WP_061572700.1	amino acid ABC transporter ATP-binding protein	-
AAHT65_RS20665 (AAHT65_20660)	-	4091043..4091861 (+)	819	WP_343311568.1	transporter substrate-binding domain-containing protein	-
AAHT65_RS20670 (AAHT65_20665)	-	4091923..4092573 (+)	651	WP_106270879.1	amino acid ABC transporter permease	-
AAHT65_RS20675 (AAHT65_20670)	-	4092592..4093248 (+)	657	WP_343310754.1	amino acid ABC transporter permease	-
AAHT65_RS20680 (AAHT65_20675)	-	4093285..4093416 (-)	132	WP_003325315.1	YrzQ family protein	-
AAHT65_RS20685 (AAHT65_20680)	-	4093442..4093633 (-)	192	WP_003325314.1	hypothetical protein	-
AAHT65_RS20690 (AAHT65_20685)	-	4093646..4094110 (-)	465	WP_061572696.1	PRC-barrel domain-containing protein	-
AAHT65_RS20695 (AAHT65_20690)	recD2	4094226..4096619 (-)	2394	WP_343310755.1	ATP-dependent RecD-like DNA helicase	Machinery gene
AAHT65_RS20700 (AAHT65_20695)	-	4096653..4097273 (-)	621	WP_094233205.1	tetratricopeptide repeat protein	-
AAHT65_RS20705 (AAHT65_20700)	mnmA	4097364..4098479 (-)	1116	WP_088117657.1	tRNA 2-thiouridine(34) synthase MnmA	-
AAHT65_RS20710 (AAHT65_20705)	-	4098513..4099655 (-)	1143	WP_343310756.1	cysteine desulfurase family protein	-
AAHT65_RS20715 (AAHT65_20710)	cymR	4099674..4100090 (-)	417	WP_010789329.1	cysteine metabolism transcriptional regulator CymR	-
AAHT65_RS20720 (AAHT65_20715)	-	4100293..4101561 (+)	1269	WP_003325306.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 797 a.a.
• Molecular weight: 89230.92 Da
• Isoelectric Point: 5.0751

>NTDB_id=993470 AAHT65_RS20695 WP_343310755.1 4094226..4096619(-) (recD2) [Bacillus atrophaeus strain SW]
MQQHPDQLKMEEEPFLKGAVTTVIYHNDVNLYTVLKVKVTETSEAIEDKVVSVTGYFPALQEEETYTFYGKTATHPKFGL
QFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKRLGDSALNRILADSSVLYDVPKLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFVKADELGGRMGISGNHPERIKAAILYSIETT
CLSEGHTYIETKQLIIDTQKLLNQSSEGQLVTEMDAANEIIALGENKAIMIEDDRCYFPSLYYAEQNVAKRVRHIASQTE
YEDQFPESEFLLALGDLEERTKVQYAASQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYSELHGASLDPSDYKKDE
VFPFVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTDENPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQII
IVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHDMKKGLLPANLTAPTKDRSFIRCGSLQIKEVV
EKVVTNALKKGYTARDIQVLAPMYRGKAGINELNVLLQGILNPPKEKRREIKFGDVVYRTGDKILQLVNQPENNVFNGDI
GEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFGQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITR
AKKFLILCGEEEALEWGVKNNDATVRQTSLQRRLTLQAEEMDEELIALQKELPFSVYDANIGMEGITPFDFMKEEHS

Nucleotide

• Length: 2394 bp

>NTDB_id=993470 AAHT65_RS20695 WP_343310755.1 4094226..4096619(-) (recD2) [Bacillus atrophaeus strain SW]
GTGCAGCAGCATCCGGATCAGCTGAAAATGGAGGAAGAACCCTTTTTAAAAGGTGCGGTAACCACTGTCATTTATCATAA
TGATGTCAATTTATATACAGTATTGAAAGTGAAAGTCACAGAGACCTCCGAAGCGATTGAAGATAAAGTCGTATCCGTGA
CGGGCTACTTCCCTGCGCTGCAAGAAGAAGAGACCTACACGTTTTACGGAAAAACAGCCACCCATCCTAAATTCGGGCTC
CAGTTTCAAGCGGAGCACTTTAAAAAAGAGATCCCGACTACGAAGGAAGGGATCATCCAATACTTATCAAGTGATCTGTT
TGAAGGAATCGGAAAGAAAACGGCTGAAGAAATCGTCAAAAGACTGGGAGACAGCGCTCTTAATCGAATTCTCGCTGACT
CCTCAGTGCTTTACGATGTGCCGAAGCTGTCAAAAAAGAAAGCTGATACGCTGGCAGGAGCTCTTCAGCGGCATCAAGGC
CTGGAACAAATTATGATCTCGCTGAACCAGTTCGGATTCGGTCCGCAGCTTTCAATGAAAATTTATCAGGCATATGAATC
GGAAACACTTGAGAAGATTCAAGAAAATCCGTATCAGCTTGTGAAAGATGTGGAAGGCATCGGGTTTGTGAAAGCCGATG
AACTCGGGGGAAGAATGGGGATTTCCGGCAATCACCCTGAGCGGATTAAAGCAGCGATTTTGTATTCCATTGAAACGACA
TGTCTTTCAGAAGGACATACGTACATAGAAACAAAGCAGCTTATTATTGATACGCAAAAGCTTTTGAACCAATCATCAGA
AGGACAGCTGGTGACAGAGATGGACGCAGCGAATGAAATCATCGCGCTTGGCGAAAATAAAGCTATCATGATTGAGGATG
ACCGCTGTTACTTTCCATCGTTATATTATGCGGAACAAAACGTAGCCAAGCGTGTCCGGCATATTGCAAGCCAAACTGAG
TATGAAGACCAATTTCCTGAATCTGAGTTTTTACTCGCGCTCGGTGATCTCGAAGAGCGTACGAAAGTTCAGTATGCGGC
AAGCCAAAAAGAAGCGATTCAAAAAGCGCTCTCGTCCCCGATGCTTCTGTTAACGGGAGGACCCGGCACCGGAAAAACCA
CCGTTATCAGAGGGATTGTGGAGTTATACAGTGAGCTTCACGGCGCTTCGCTTGATCCGTCCGATTATAAGAAAGATGAA
GTTTTTCCGTTTGTTTTGGCTGCGCCGACAGGAAGAGCCGCAAAACGAATGAGTGAATCGACCGGACTTCCGGCCGTCAC
GATTCACAGGCTGCTTGGCTGGAACGGGGCTGAAGGGTTTACTCATACAGACGAAAATCCGATTGAAGGAAAGCTGTTAA
TTATAGACGAAGCGAGTATGCTTGATATATGGCTCGCAAACCATTTGTTTAAAGCGATACCCGATCATATTCAAATTATT
ATAGTGGGGGATGAGGACCAGCTTCCTTCTGTCGGGCCGGGACAGGTGCTGCGGGATCTGTTGGCTTCGCAGGTCATTCC
GACAGTCAGGCTGACAGATATTTACCGGCAGGCGGAAGGTTCATCTATTGTGGAGCTTGCTCACGACATGAAAAAAGGCT
TGCTTCCGGCTAACCTGACAGCACCCACCAAGGATCGTTCCTTTATTCGCTGCGGCTCATTACAAATCAAAGAAGTTGTC
GAAAAGGTCGTCACCAATGCATTGAAAAAGGGCTACACAGCAAGGGATATACAGGTGCTGGCTCCGATGTACAGAGGAAA
AGCAGGCATTAATGAGCTTAATGTGCTGCTGCAGGGCATCTTAAATCCGCCGAAAGAAAAACGGCGCGAAATTAAATTCG
GCGATGTTGTTTATAGAACCGGCGATAAAATTTTACAGCTTGTGAATCAGCCGGAAAATAATGTGTTTAATGGTGATATT
GGTGAGATTACATCCATTTTCTACGCGAAGGAAAATACAGAAAAAGAAGATATGGCGGTTGTTTCCTTTGACGGAAATGA
AATGACCTTCACCAAAAAAGACTTCGGCCAGTTTACGCACGCCTATTGCTGCTCCATTCATAAATCTCAAGGCAGTGAAT
TTCCGATAGTCGTGCTTCCCGTTGTAAAAGGCTATTATCGAATGCTGAGAAGAAATCTCCTCTATACGGCAATTACAAGA
GCGAAAAAGTTTCTCATTTTATGCGGTGAAGAGGAAGCGCTGGAGTGGGGCGTGAAAAATAATGATGCGACAGTCAGACA
AACCTCTTTACAAAGAAGGCTGACCCTGCAGGCTGAGGAAATGGATGAAGAACTTATAGCTCTTCAAAAAGAGCTGCCGT
TTAGCGTATACGACGCAAATATCGGCATGGAAGGCATTACGCCATTTGATTTTATGAAAGAAGAACATAGCTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-661)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

• AAA domain (AAA_30) (345-553)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	91.97	100	0.92