Detailed information NTG0993396

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: E0E14_RS08540
• Genome accession: NZ_LR027877
• Coordinates: 1696504..1697778 (+)
• Length: 424 a.a.
• NCBI ID: WP_000102735.1
• Uniprot ID: -
• Organism: Staphylococcus aureus isolate BPH3244
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1691504..1702778

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E0E14_RS08510	mnmA	1691706..1692824 (-)	1119	WP_000066097.1	tRNA 2-thiouridine(34) synthase MnmA	-
E0E14_RS08515	-	1692825..1693967 (-)	1143	WP_000409167.1	cysteine desulfurase family protein	-
E0E14_RS08520	-	1694279..1695292 (+)	1014	WP_000985886.1	LLM class flavin-dependent oxidoreductase	-
E0E14_RS08525	-	1695529..1695675 (-)	147	WP_000009238.1	SAS049 family protein	-
E0E14_RS08530	-	1695715..1695897 (-)	183	WP_000752913.1	CsbD family protein	-
E0E14_RS08535	cymR	1695997..1696419 (-)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
E0E14_RS08540	rarA	1696504..1697778 (+)	1275	WP_000102735.1	replication-associated recombination protein A	Machinery gene
E0E14_RS08545	-	1697939..1698712 (-)	774	WP_000682646.1	tRNA threonylcarbamoyladenosine dehydratase	-
E0E14_RS08550	-	1698712..1698840 (-)	129	WP_001790559.1	hypothetical protein	-
E0E14_RS08560	aspS	1699173..1700939 (-)	1767	WP_000044799.1	aspartate--tRNA ligase	-
E0E14_RS08565	hisS	1700955..1702217 (-)	1263	WP_000590826.1	histidine--tRNA ligase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47250.81 Da
• Isoelectric Point: 8.3539

>NTDB_id=993396 E0E14_RS08540 WP_000102735.1 1696504..1697778(+) (rarA) [Staphylococcus aureus isolate BPH3244]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDDENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=993396 E0E14_RS08540 WP_000102735.1 1696504..1697778(+) (rarA) [Staphylococcus aureus isolate BPH3244]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGATACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTCGAGTTATATCCTTTAAATGACGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGATGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGCCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGACAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTAAAAAACAAAATTTATTAC
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (175-253)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.048	99.057	0.684