Detailed information NTG0992771

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: EC1639_RS01185
• Genome accession: NZ_LR025101
• Coordinates: 250835..251860 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli isolate EC-1639
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 245835..256860

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EC1639_RS01155 (EC1639_00235)	zapB	245919..246164 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
EC1639_RS01160 (EC1639_00236)	rraA	246249..246734 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
EC1639_RS01165 (EC1639_00237)	menA	246827..247753 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
EC1639_RS01170 (EC1639_00238)	hslU	247820..249151 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
EC1639_RS01175 (EC1639_00239)	hslV	249161..249691 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
EC1639_RS01180 (EC1639_00240)	ftsN	249784..250743 (-)	960	WP_000068828.1	cell division protein FtsN	-
EC1639_RS01185 (EC1639_00241)	cytR	250835..251860 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
EC1639_RS01190 (EC1639_00242)	priA	252016..254214 (-)	2199	WP_001586520.1	primosomal protein N'	Machinery gene
EC1639_RS01195 (EC1639_00243)	rpmE	254417..254629 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
EC1639_RS01200 (EC1639_00244)	yiiX	254690..255298 (-)	609	WP_001577479.1	YiiX family permuted papain-like enzyme	-
EC1639_RS01205 (EC1639_00245)	metJ	255358..255675 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=992771 EC1639_RS01185 WP_000644904.1 250835..251860(-) (cytR) [Escherichia coli isolate EC-1639]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=992771 EC1639_RS01185 WP_000644904.1 250835..251860(-) (cytR) [Escherichia coli isolate EC-1639]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTTGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGTTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628