Detailed information NTG0099261

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ACKTSO_RS02390
• Genome accession: NZ_AP035889
• Coordinates: 494574..495911 (-)
• Length: 445 a.a.
• NCBI ID: WP_407902802.1
• Uniprot ID: -
• Organism: Gallibacterium anatis strain SMUHGa01
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 489574..500911

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKTSO_RS02375 (SMUG_04470)	-	490361..491383 (-)	1023	WP_407903136.1	ABC transporter ATP-binding protein	-
ACKTSO_RS02380 (SMUG_04480)	-	491386..493032 (-)	1647	WP_407902801.1	ABC transporter permease	-
ACKTSO_RS02385 (SMUG_04490)	-	493106..494116 (-)	1011	WP_021462428.1	Fe(3+) ABC transporter substrate-binding protein	-
ACKTSO_RS02390 (SMUG_04500)	rarA	494574..495911 (-)	1338	WP_407902802.1	replication-associated recombination protein A	Machinery gene
ACKTSO_RS02395 (SMUG_04510)	lolA	495931..496545 (-)	615	WP_013745283.1	outer membrane lipoprotein chaperone LolA	-
ACKTSO_RS02400 (SMUG_04520)	-	496556..499426 (-)	2871	WP_407902803.1	DNA translocase FtsK	-
ACKTSO_RS02405 (SMUG_04530)	-	499595..499969 (+)	375	WP_407902804.1	MmcQ/YjbR family DNA-binding protein	-
ACKTSO_RS02410	-	500013..500507 (-)	495	WP_407902805.1	FtsX-like permease family protein	-
ACKTSO_RS02415 (SMUG_04550)	-	500423..500758 (-)	336	WP_407902806.1	hypothetical protein	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49718.74 Da
• Isoelectric Point: 6.7068

>NTDB_id=99261 ACKTSO_RS02390 WP_407902802.1 494574..495911(-) (rarA) [Gallibacterium anatis strain SMUHGa01]
METLDLNFSGDDFRPLAARMRPTSLDNYFGQSHLVGKGKPLRKAIESGNIHSMIFWGPPGTGKTTLAEIIAHRLNAKVEY
LSAVTSGVKEIREAIERAKQNQFAGQQTLLFVDEVHRFNKSQQDAFLPYIEDGTIIFIGATTENPSFELNSALLSRARVY
LLKSLNIDEIVEVLQRALQDKQFGYGNQIINLEDGLLAILAEYVNGDARLALNCLELMVDMAEETPKGKLLTKQLLVDTL
GERQARFDKQGDRYYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRLLAIASEDIGNADPRAMEVALNAWDCF
TRVGAAEGERAIAQAIVYLAAAPKSNAVYLAFKQAKQLATQYPDFDVPLHLRNAPTTLMKNMGIGKNYRYAHDEPNAYAA
GENYFPEPLKGTRLYFPNERGMEIKIKQKLDWLAQLDEEAKHKKS

Nucleotide

• Length: 1338 bp

>NTDB_id=99261 ACKTSO_RS02390 WP_407902802.1 494574..495911(-) (rarA) [Gallibacterium anatis strain SMUHGa01]
ATGGAAACGCTTGATTTAAATTTTTCCGGTGATGATTTTCGCCCTTTAGCTGCAAGGATGCGTCCAACCTCATTGGATAA
TTATTTTGGTCAAAGTCATCTGGTCGGTAAAGGAAAGCCGCTACGCAAAGCAATTGAAAGCGGCAATATTCACTCTATGA
TTTTTTGGGGGCCACCCGGTACCGGTAAAACGACATTAGCAGAAATTATTGCCCATCGCTTAAATGCAAAAGTGGAATAT
CTTTCTGCCGTTACCAGTGGTGTGAAAGAGATCCGCGAAGCGATAGAACGGGCTAAACAGAACCAATTTGCCGGTCAACA
AACTTTGTTATTTGTGGATGAAGTGCATCGCTTTAATAAATCACAGCAGGATGCCTTTTTGCCCTATATTGAAGACGGCA
CTATTATCTTTATCGGCGCAACAACGGAGAACCCCTCTTTTGAATTAAATAGCGCATTACTCTCACGTGCCAGAGTTTAT
CTTTTAAAATCGCTTAATATCGATGAGATTGTTGAAGTGTTGCAGCGTGCTTTACAGGATAAACAATTCGGCTATGGCAA
CCAGATCATTAATCTTGAAGATGGCTTATTAGCCATACTGGCAGAATACGTCAATGGCGATGCCCGTTTGGCATTAAACT
GCTTAGAATTAATGGTTGATATGGCAGAGGAAACGCCAAAAGGAAAACTACTGACGAAGCAATTATTAGTTGATACTTTG
GGGGAAAGGCAAGCACGCTTTGATAAACAGGGCGACCGTTATTATGACTTAATTTCAGCATTGCATAAATCTGTACGCGG
TTCTGCGCCTGATGCCGCACTTTATTGGTATGCGCGAATTATTACTGCCGGCGGTGATCCGCTCTATGTCGCTCGCCGTT
TATTAGCCATTGCTTCAGAAGATATCGGCAATGCCGATCCAAGAGCAATGGAAGTTGCGTTGAATGCGTGGGACTGTTTC
ACGCGTGTGGGTGCAGCAGAAGGTGAACGTGCGATTGCTCAAGCCATTGTCTATTTAGCGGCAGCGCCGAAAAGTAATGC
TGTTTATCTTGCCTTCAAACAGGCAAAACAGCTCGCAACACAATATCCCGATTTTGATGTACCATTGCATTTGCGTAATG
CGCCGACAACACTGATGAAAAATATGGGTATCGGTAAAAATTATCGCTATGCACACGATGAGCCAAATGCTTATGCCGCT
GGTGAAAACTATTTTCCGGAGCCTCTAAAAGGAACGCGGTTATATTTCCCAAATGAGCGTGGAATGGAGATCAAAATCAA
ACAAAAATTAGATTGGCTAGCCCAGTTAGATGAAGAGGCAAAGCATAAAAAATCATAG

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (53-159)

• AAA C-terminal domain (AAA_assoc_2) (188-266)

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.007	95.056	0.371