Detailed information NTG0991777

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: AAHY98_RS21115
• Genome accession: NZ_CP153690
• Coordinates: 4272470..4273270 (+)
• Length: 266 a.a.
• NCBI ID: WP_004191960.1
• Uniprot ID: A0AAJ5B1F9
• Organism: Klebsiella pneumoniae strain Kpn279
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4267470..4278270

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAHY98_RS21080 (AAHY98_21030)	gspH	4267626..4268135 (+)	510	WP_023341042.1	type II secretion system minor pseudopilin GspH	-
AAHY98_RS21085 (AAHY98_21035)	gspI	4268138..4268503 (+)	366	WP_002889025.1	type II secretion system minor pseudopilin GspI	-
AAHY98_RS21090 (AAHY98_21040)	gspJ	4268500..4269096 (+)	597	WP_023341041.1	type II secretion system minor pseudopilin GspJ	-
AAHY98_RS21095 (AAHY98_21045)	gspK	4269093..4270079 (+)	987	WP_004178610.1	type II secretion system minor pseudopilin GspK	-
AAHY98_RS21100 (AAHY98_21050)	gspL	4270066..4271259 (+)	1194	WP_373853325.1	type II secretion system protein GspL	-
AAHY98_RS21105 (AAHY98_21055)	-	4271252..4271737 (+)	486	WP_004183037.1	type II secretion system protein M	-
AAHY98_RS21110 (AAHY98_21060)	-	4271727..4272473 (+)	747	WP_004145897.1	type II secretion system protein N	-
AAHY98_RS21115 (AAHY98_21065)	pilD	4272470..4273270 (+)	801	WP_004191960.1	A24 family peptidase	Machinery gene
AAHY98_RS21120 (AAHY98_21070)	hrpB	4273318..4275747 (-)	2430	WP_373853326.1	ATP-dependent helicase HrpB	-
AAHY98_RS21125 (AAHY98_21075)	thpR	4275820..4276356 (+)	537	WP_040152504.1	RNA 2',3'-cyclic phosphodiesterase	-
AAHY98_RS21130 (AAHY98_21080)	sfsA	4276356..4277072 (+)	717	WP_002888848.1	DNA/RNA nuclease SfsA	-
AAHY98_RS21135 (AAHY98_21085)	dksA	4277235..4277690 (+)	456	WP_002888845.1	RNA polymerase-binding protein DksA	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29403.04 Da
• Isoelectric Point: 8.8894

>NTDB_id=991777 AAHY98_RS21115 WP_004191960.1 4272470..4273270(+) (pilD) [Klebsiella pneumoniae strain Kpn279]
MTTLAALSLHFPFVWYGFLLLFGLALGSFYNVVIYRLPRMLTQTADDERITLSTPGSSCPQCRQPIAWRDNIPLLSFLWL
GRRARCCQAPIAWSYPLTELATGLLFILAGALLAPGLPLAGGLVLLSFLLILARIDARTQLLPDRLTLPLLWAGLLFNLN
EVYIALPDAVAGAMAGYLALWSVYWLFRLLTGKEALGYGDFKLLAALGAWCGWQVLPQVLLLASASGLVWTLLQRLWTRQ
SLQQPLAFGPWLALAGGGIFLWQQMI

Nucleotide

• Length: 801 bp

>NTDB_id=991777 AAHY98_RS21115 WP_004191960.1 4272470..4273270(+) (pilD) [Klebsiella pneumoniae strain Kpn279]
ATGACGACACTAGCCGCGTTATCGCTGCACTTTCCCTTTGTCTGGTATGGCTTTCTGCTGCTGTTCGGCCTGGCGCTGGG
CAGCTTTTACAATGTGGTGATCTATCGTCTGCCGCGCATGTTGACCCAGACCGCGGACGACGAGCGGATAACCCTCAGCA
CCCCGGGATCTTCCTGCCCGCAGTGCCGCCAGCCGATCGCCTGGCGGGACAATATCCCGCTGCTCAGTTTCCTCTGGCTG
GGCCGTCGCGCCCGCTGCTGTCAGGCGCCCATCGCGTGGAGCTATCCGCTGACCGAGCTGGCCACCGGCCTGCTGTTTAT
CCTCGCCGGAGCTTTGCTGGCGCCGGGCCTGCCGCTGGCGGGCGGCCTGGTGCTGCTCTCGTTCCTGCTGATACTGGCGC
GGATTGACGCCCGGACCCAGCTGCTGCCCGATCGCCTGACTCTGCCCCTGCTGTGGGCCGGGCTGCTGTTCAATCTTAAC
GAGGTGTACATTGCCCTGCCGGATGCGGTCGCCGGGGCGATGGCCGGTTATCTGGCGCTGTGGTCGGTCTACTGGCTGTT
CCGCCTGCTGACCGGGAAAGAGGCGCTGGGCTATGGCGATTTTAAGCTGCTGGCGGCGCTGGGCGCCTGGTGCGGCTGGC
AGGTTCTGCCGCAGGTGCTGTTGCTCGCTTCGGCCAGCGGGCTGGTGTGGACCCTACTGCAACGCCTGTGGACCCGGCAG
TCGCTGCAGCAGCCGCTGGCCTTCGGCCCCTGGCTGGCGCTGGCCGGCGGGGGTATTTTTCTCTGGCAGCAGATGATCTA
G

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-109)

• Type IV leader peptidase family (Peptidase_A24) (123-231)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Vibrio cholerae strain A1552	49.057	99.624	0.489
pilD	Vibrio campbellii strain DS40M4	46.545	100	0.481
pilD	Acinetobacter nosocomialis M2	46.388	98.872	0.459
pilD	Acinetobacter baumannii D1279779	45.627	98.872	0.451
pilD	Neisseria gonorrhoeae MS11	43.922	95.865	0.421