Detailed information NTG0990416

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: MWH27_RS14040
• Genome accession: NZ_JALJVV010000001
• Coordinates: 2584484..2585749 (+)
• Length: 421 a.a.
• NCBI ID: WP_014480427.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain A-5
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2579484..2590749

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MWH27_RS14020 (MWH27_13995)	yrrB	2580855..2581475 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
MWH27_RS14025 (MWH27_14000)	mnmA	2581561..2582676 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
MWH27_RS14030 (MWH27_14005)	iscSA	2582707..2583846 (-)	1140	WP_014480425.1	cysteine desulfurase family protein	-
MWH27_RS14035 (MWH27_14010)	cymR	2583865..2584281 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
MWH27_RS14040 (MWH27_14015)	rarA	2584484..2585749 (+)	1266	WP_014480427.1	replication-associated recombination protein A	Machinery gene
MWH27_RS14045 (MWH27_14020)	tcdA	2585789..2586553 (-)	765	WP_014480428.1	ThiF family adenylyltransferase	-
MWH27_RS14055 (MWH27_14030)	aspS	2586888..2588666 (-)	1779	WP_014480429.1	aspartate--tRNA ligase	-
MWH27_RS14060 (MWH27_14035)	hisS	2588680..2589954 (-)	1275	WP_014480430.1	histidine--tRNA ligase	-
MWH27_RS14065 (MWH27_14040)	yrzK	2590336..2590506 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.29 Da
• Isoelectric Point: 7.2043

>NTDB_id=990416 MWH27_RS14040 WP_014480427.1 2584484..2585749(+) (rarA) [Bacillus subtilis strain A-5]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=990416 MWH27_RS14040 WP_014480427.1 2584484..2585749(+) (rarA) [Bacillus subtilis strain A-5]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993