Detailed information NTG0989489

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: HMPREF9425_RS01830
• Genome accession: NZ_GL831112
• Coordinates: 348505..349290 (+)
• Length: 261 a.a.
• NCBI ID: WP_003093975.1
• Uniprot ID: A0ABN0CIC2
• Organism: Streptococcus vestibularis ATCC 49124
• Function: repress the expression of comX (predicted from homology) Competence regulation

Genomic Context

Location: 343505..354290

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HMPREF9425_RS01800 (HMPREF9425_0379)	-	343865..344179 (+)	315	WP_003096236.1	hypothetical protein	-
HMPREF9425_RS01805 (HMPREF9425_0380)	-	344176..344328 (+)	153	WP_003096238.1	LPXTG cell wall anchor domain-containing protein	-
HMPREF9425_RS01810 (HMPREF9425_0381)	pflA	344516..345316 (+)	801	WP_003094298.1	pyruvate formate-lyase-activating protein	-
HMPREF9425_RS01815 (HMPREF9425_0382)	-	345386..346138 (+)	753	WP_003096240.1	hypothetical protein	-
HMPREF9425_RS01820 (HMPREF9425_0383)	-	346216..346668 (-)	453	WP_002891687.1	universal stress protein	-
HMPREF9425_RS01825 (HMPREF9425_0385)	-	347032..348246 (+)	1215	WP_003096246.1	pyridoxal phosphate-dependent aminotransferase	-
HMPREF9425_RS01830 (HMPREF9425_0386)	codY	348505..349290 (+)	786	WP_003093975.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
HMPREF9425_RS01835 (HMPREF9425_0387)	-	349352..349903 (+)	552	WP_003093202.1	cysteine hydrolase family protein	-
HMPREF9425_RS01840 (HMPREF9425_0388)	-	350109..351548 (+)	1440	WP_003093820.1	6-phospho-beta-glucosidase	-
HMPREF9425_RS10165 (HMPREF9425_0389)	-	351908..352174 (+)	267	WP_003094814.1	glycosyltransferase	-
HMPREF9425_RS10565	-	352128..352625 (+)	498	Protein_373	glycosyltransferase	-
HMPREF9425_RS01855 (HMPREF9425_0391)	gatC	352765..353067 (+)	303	WP_002884769.1	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	-

Sequence

Protein

• Length: 261 a.a.
• Molecular weight: 28802.83 Da
• Isoelectric Point: 4.3664

>NTDB_id=989489 HMPREF9425_RS01830 WP_003093975.1 348505..349290(+) (codY) [Streptococcus vestibularis ATCC 49124]
MANLLAKTRKITSILQRSVDSLEGDLPYNNMAAQLADIIDCNAAIVNGGGALLGFAMKYKTNTDRVEEFFEAKQLPEEYT
RGISRVYDTQENIGIDSDLTIFPVESKDDFPDGLTTIAPIYGGGMRLGSFIIWRNDHDFVDDDLILVEIASTVVGLQLLN
LQTENLEETIRKQTAINMAINTLSYSEIKAVSAILNELDGLEGRLTASVIADRIGITRSVIVNALRKLESAGIIESRSLG
MKGTYLKVLNEGIYDKLKEYE

Nucleotide

• Length: 786 bp

>NTDB_id=989489 HMPREF9425_RS01830 WP_003093975.1 348505..349290(+) (codY) [Streptococcus vestibularis ATCC 49124]
ATGGCAAATTTGCTGGCTAAAACACGTAAAATTACTTCTATCTTGCAACGCTCAGTAGATAGCTTGGAAGGAGATCTTCC
ATACAACAACATGGCTGCTCAGTTGGCAGATATTATTGATTGTAATGCTGCTATCGTAAATGGTGGTGGTGCTCTCCTTG
GTTTTGCTATGAAATACAAAACCAATACTGACCGTGTGGAAGAGTTTTTTGAAGCGAAACAACTTCCAGAGGAATACACA
CGTGGTATTAGCCGTGTTTATGATACTCAAGAAAATATCGGTATTGACAGTGACTTGACCATCTTCCCAGTGGAATCAAA
AGATGATTTTCCAGACGGTTTAACGACAATTGCACCAATCTATGGTGGTGGTATGCGTCTTGGTTCTTTCATTATTTGGC
GTAACGACCATGATTTTGTGGACGACGACCTTATCTTGGTTGAGATTGCATCTACAGTAGTTGGTTTGCAATTGTTGAAT
CTTCAAACAGAAAACTTGGAAGAAACGATTCGTAAACAAACAGCTATTAATATGGCTATTAACACCTTGTCTTACTCAGA
AATCAAGGCAGTTTCAGCTATTTTGAATGAGTTGGACGGTTTAGAAGGTCGTTTGACAGCCTCTGTTATCGCGGACCGTA
TCGGAATCACTCGTTCTGTTATTGTTAATGCTCTTCGTAAATTAGAATCAGCTGGTATTATTGAAAGTCGTTCGCTTGGT
ATGAAAGGAACTTATCTTAAAGTCCTTAACGAAGGTATCTACGACAAATTGAAAGAATACGAATAA

Domains

Predicted by InterProScan.

• CodY GAF-like domain (CodY) (3-182)

• CodY helix-turn-helix domain (HTH_CodY) (201-261)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Lactococcus lactis subsp. lactis strain DGCC12653	64.981	98.467	0.64
codY	Bacillus subtilis subsp. subtilis str. 168	53.036	94.636	0.502