Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   HMPREF9319_RS08440 Genome accession   NZ_GL397128
Coordinates   1761452..1763788 (-) Length   778 a.a.
NCBI ID   WP_003066447.1    Uniprot ID   E0PFY9
Organism   Streptococcus equinus ATCC 700338     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1756452..1768788
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HMPREF9319_RS08415 (HMPREF9319_1757) trxA 1756873..1757187 (-) 315 WP_003066440.1 thioredoxin -
  HMPREF9319_RS08420 (HMPREF9319_1758) - 1757427..1757924 (+) 498 WP_003066443.1 phosphatase PAP2 family protein -
  HMPREF9319_RS08425 (HMPREF9319_1759) nadC 1758004..1758864 (-) 861 WP_013852244.1 carboxylating nicotinate-nucleotide diphosphorylase -
  HMPREF9319_RS08430 (HMPREF9319_1760) - 1758892..1760196 (-) 1305 WP_003066445.1 L-aspartate oxidase -
  HMPREF9319_RS08435 (HMPREF9319_1761) nadA 1760433..1761353 (+) 921 WP_003066446.1 quinolinate synthase NadA -
  HMPREF9319_RS08440 (HMPREF9319_1762) mutS/mutS2 1761452..1763788 (-) 2337 WP_003066447.1 endonuclease MutS2 Machinery gene
  HMPREF9319_RS08445 (HMPREF9319_1763) - 1763894..1764442 (-) 549 WP_003066448.1 CvpA family protein -
  HMPREF9319_RS08450 (HMPREF9319_1764) zapA 1764445..1764753 (-) 309 WP_003066449.1 cell division protein ZapA -
  HMPREF9319_RS08455 (HMPREF9319_1765) rnhC 1764875..1765777 (+) 903 WP_003066450.1 ribonuclease HIII -
  HMPREF9319_RS08460 (HMPREF9319_1766) lepB 1765794..1766387 (+) 594 WP_003066451.1 signal peptidase I -
  HMPREF9319_RS08465 (HMPREF9319_1767) - 1766515..1768708 (+) 2194 Protein_1720 ATP-dependent RecD-like DNA helicase -

Sequence

Protein


Download         Length: 778 a.a.        Molecular weight: 87749.14 Da        Isoelectric Point: 6.2053

>NTDB_id=989439 HMPREF9319_RS08440 WP_003066447.1 1761452..1763788(-) (mutS/mutS2) [Streptococcus equinus ATCC 700338]
MNNRILEQLEFDKVKQLFAGYLQTEQGQDELRKLEPMTEPDRISRSFDEMSDMEQIFIEHHSFGMGILRDISESMRRLEL
DADVNISEIIDIKKVLQVSAEIKHFYNDLENVELSALNTLFEKIELLPSLQGSLQAINDGGFIENFASSELDRIRRQINH
DEGRVRQILQDILKKQADHLTETLIASRNGRAVLPVKNSYRNRISGVVHDISASGSTVYIEPRAVVQLNEEITQLRADER
HEMARILRELSNMLRPHTNIIRNNAWVLGHLDFVRAKFLFMQENNAIVPQLSADKTVQLLQARHPLLTDPVANDLHFLDE
LTVIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSKVAVFNEIFADIGDEQSIEQSLSTFSSHMTNIVEILAAAD
KDSLVLVDELGAGTDPQEGASLAIAILEHLRLMEIKTMATTHYPELKAYGIETEFVENASMEFDTETLSPTYHFMQGVPG
RSNAFEIARRLGLAEIIVNEAERLTDSDTDVNHIIERLEEQNHESRKRLDHIKEVEQDNLKFNRAVKKLYNEFSHAKDKE
LEKARAKAQEIVDKAMTESEEILKNLHDRASLKPHEVIEAKSQLKKLAPEVDLSKNKVLKKAKKLRAPRVGDDIVVTAYG
QRGTLVNQGKNGKWEVQVGLIKMTLKEDEFTLVKVQEEAQKPKKKQVNVVKKSKKSAGPRARLDLRGKRYEEAMQELDEF
IDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGYAPQNAGGSGCTIANLG

Nucleotide


Download         Length: 2337 bp        

>NTDB_id=989439 HMPREF9319_RS08440 WP_003066447.1 1761452..1763788(-) (mutS/mutS2) [Streptococcus equinus ATCC 700338]
ATGAACAACAGAATTTTAGAACAGTTAGAATTTGATAAAGTCAAGCAACTTTTTGCTGGCTATTTACAGACTGAGCAAGG
CCAAGACGAGTTACGTAAACTTGAGCCAATGACTGAGCCTGACCGCATTTCACGTTCCTTTGATGAAATGTCGGACATGG
AACAGATTTTCATTGAACACCATTCTTTTGGAATGGGGATTTTGCGTGACATTTCTGAAAGTATGCGTCGCTTGGAATTG
GATGCTGACGTTAATATCTCAGAAATTATCGACATCAAGAAAGTCTTGCAAGTCTCAGCTGAAATCAAGCATTTTTATAA
TGATTTGGAAAATGTAGAGTTGTCTGCATTAAATACTCTTTTTGAGAAGATTGAATTGTTGCCAAGTCTGCAAGGTAGCT
TACAAGCGATTAATGACGGTGGTTTCATTGAAAATTTTGCAAGTTCAGAATTGGACCGTATTCGTCGCCAAATCAATCAT
GACGAAGGTAGAGTTCGTCAAATTTTGCAGGATATTTTGAAAAAACAAGCTGATCATTTGACAGAGACTTTGATTGCTAG
TCGTAATGGTCGTGCGGTTTTGCCTGTGAAAAATAGCTACCGCAACCGTATTTCAGGGGTTGTGCATGATATTTCGGCAT
CAGGAAGTACGGTTTATATTGAACCGCGCGCAGTAGTGCAACTTAATGAAGAAATCACGCAATTGCGAGCAGATGAACGT
CACGAAATGGCACGTATTTTACGTGAATTGTCAAATATGCTTCGCCCACATACTAATATTATTCGTAACAATGCGTGGGT
TTTAGGGCATTTGGATTTTGTTCGTGCTAAGTTCCTCTTCATGCAGGAAAACAACGCAATCGTGCCACAATTATCAGCAG
ATAAAACCGTGCAACTATTACAAGCTCGCCACCCGCTTTTGACCGATCCAGTCGCCAATGACCTTCATTTTCTTGACGAA
TTGACCGTTATTGTTATTACAGGCCCAAATACTGGTGGTAAGACAGTCATGTTGAAAACATTAGGCTTAGCGCAGCTTAT
GGCGCAATCAGGCTTGCCAATCTTGGCTGACAAGGGGAGTAAAGTCGCCGTATTTAATGAGATTTTTGCAGATATTGGTG
ATGAGCAATCTATCGAACAAAGTTTGTCAACATTCTCAAGCCATATGACAAATATTGTTGAGATTTTGGCAGCAGCAGAT
AAAGATAGTCTTGTCTTGGTCGATGAATTGGGAGCAGGAACTGACCCACAAGAAGGTGCCAGTCTTGCGATTGCCATTCT
TGAACACCTTCGTCTCATGGAAATTAAAACCATGGCAACGACACATTATCCAGAATTGAAAGCTTACGGTATTGAGACAG
AATTTGTGGAAAATGCCAGTATGGAATTTGATACAGAGACATTAAGTCCAACTTATCATTTTATGCAAGGTGTACCAGGG
CGCTCAAATGCCTTTGAAATTGCTCGTCGTCTTGGTTTAGCAGAGATTATTGTCAATGAAGCAGAGCGTTTGACAGACTC
TGATACGGATGTTAACCATATCATCGAGCGTTTGGAAGAACAAAACCATGAAAGTCGTAAACGACTTGACCATATCAAAG
AAGTGGAACAAGATAACCTCAAATTCAATCGTGCGGTCAAGAAACTTTATAACGAATTTTCACATGCCAAGGACAAAGAA
CTTGAAAAAGCTCGCGCCAAAGCGCAAGAAATTGTGGATAAAGCCATGACAGAGAGTGAAGAAATTCTCAAAAATCTTCA
TGATAGAGCAAGCCTTAAACCGCATGAAGTTATTGAAGCCAAAAGTCAGCTGAAAAAATTGGCGCCTGAAGTTGATTTGT
CGAAAAATAAAGTCCTCAAGAAAGCTAAAAAATTGCGCGCACCGCGCGTGGGTGATGACATTGTCGTCACAGCTTACGGA
CAACGCGGAACATTGGTTAACCAAGGGAAAAACGGGAAATGGGAAGTGCAAGTTGGTCTTATTAAAATGACACTTAAAGA
GGACGAATTTACCCTTGTTAAAGTTCAAGAGGAAGCCCAAAAACCGAAGAAAAAACAAGTCAATGTGGTCAAGAAAAGCA
AAAAATCAGCTGGTCCACGTGCCCGCCTTGATCTTCGTGGTAAACGCTATGAAGAAGCCATGCAAGAATTGGATGAATTT
ATCGACCAAGCCTTGCTAAATAACATGGCACAAGTCGATATTATTCACGGTATCGGAACAGGTGTTATCCGTGAAGGTGT
CACAAAATACCTTCGCCGCAACAAACACGTCAAATCATTTGGTTATGCCCCACAAAATGCAGGTGGCAGCGGCTGCACCA
TTGCAAATCTAGGGTGA

Domains

Predicted by InterProScan.

Smr domain (Smr)

(703-776)

MutS domain V (MutS_V)

(324-505)

MutS2 and Smr-associated SH3 domain (MSSS)

(630-669)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB E0PFY9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

41.139

100

0.418