Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   V7S45_RS20465 Genome accession   NZ_CP152433
Coordinates   3998812..3999606 (-) Length   264 a.a.
NCBI ID   WP_011110369.1    Uniprot ID   A0A9Q5QPF5
Organism   Bacillus sp. BR3(2024)     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3993812..4004606
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V7S45_RS20440 (V7S45_20445) - 3994336..3996408 (-) 2073 WP_033666632.1 sigma-54-dependent Fis family transcriptional regulator -
  V7S45_RS20445 (V7S45_20450) - 3996546..3996779 (+) 234 WP_001190211.1 DUF2627 domain-containing protein -
  V7S45_RS20450 (V7S45_20455) - 3996829..3997557 (-) 729 WP_089607623.1 glycerophosphodiester phosphodiesterase -
  V7S45_RS20455 (V7S45_20460) - 3997608..3997754 (+) 147 WP_001247671.1 YycC family protein -
  V7S45_RS20460 (V7S45_20465) - 3997997..3998559 (-) 563 Protein_3972 PRK06770 family protein -
  V7S45_RS20465 (V7S45_20470) spo0A 3998812..3999606 (-) 795 WP_011110369.1 sporulation transcription factor Spo0A Regulator
  V7S45_RS20470 (V7S45_20475) spoIVB 3999897..4001195 (-) 1299 WP_002000940.1 SpoIVB peptidase -
  V7S45_RS20475 (V7S45_20480) recN 4001314..4003053 (-) 1740 WP_000947768.1 DNA repair protein RecN Machinery gene
  V7S45_RS20480 (V7S45_20485) argR 4003318..4003767 (-) 450 WP_001032580.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29415.18 Da        Isoelectric Point: 7.1175

>NTDB_id=989378 V7S45_RS20465 WP_011110369.1 3998812..3999606(-) (spo0A) [Bacillus sp. BR3(2024)]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLKQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANAMIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=989378 V7S45_RS20465 WP_011110369.1 3998812..3999606(-) (spo0A) [Bacillus sp. BR3(2024)]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAACTAGTATCAATGTTAGAGAGCTATGTAGCCGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAACAGATAAGCAACCTGATGTACTCG
TTTTAGACATTATTATGCCACACTTAGATGGTTTAGCTGTATTGGAGAAAATGCGACATATTGAAAGGTTAAAACAGCCT
AGCGTAATTATGTTGACAGCATTTGGCCAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCCTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGTGGTAAAGCAAATGCTATGATTAAACGTCCAC
TACCATCATTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGATGCGAGTATTACGAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGATATATGTATTTACGAGAAGCAATCTCCATGGTATACAACGATATCGAATTATT
AGGATCGATTACGAAAGTATTGTATCCAGATATCGCAAAGAAATATAATACAACAGCAAGCCGTGTGGAGCGCGCAATTC
GTCACGCGATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCTGAGTTTATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAAGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818

Multiple sequence alignment