Detailed information NTG0989334

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: AAG068_RS22125
• Genome accession: NZ_CP152427
• Coordinates: 4273542..4275881 (-)
• Length: 779 a.a.
• NCBI ID: WP_342715822.1
• Uniprot ID: -
• Organism: Bacillus paramycoides strain JYZ-SD5
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4268542..4280881

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAG068_RS22105 (AAG068_22105)	-	4269752..4269928 (-)	177	WP_001242605.1	hypothetical protein	-
AAG068_RS22110 (AAG068_22110)	-	4270130..4270570 (-)	441	WP_001266956.1	D-tyrosyl-tRNA(Tyr) deacylase	-
AAG068_RS22115 (AAG068_22115)	relA	4270588..4272771 (-)	2184	WP_342715821.1	GTP diphosphokinase	-
AAG068_RS22120 (AAG068_22120)	-	4272982..4273494 (-)	513	WP_000346214.1	adenine phosphoribosyltransferase	-
AAG068_RS22125 (AAG068_22125)	recJ	4273542..4275881 (-)	2340	WP_342715822.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
AAG068_RS22130 (AAG068_22130)	-	4275983..4276876 (-)	894	WP_342715823.1	cation diffusion facilitator family transporter	-
AAG068_RS22135 (AAG068_22135)	secDF	4277030..4279294 (-)	2265	WP_342715824.1	protein translocase subunit SecDF	-
AAG068_RS22140 (AAG068_22140)	-	4279565..4279849 (-)	285	WP_029440002.1	post-transcriptional regulator	-

Sequence

Protein

• Length: 779 a.a.
• Molecular weight: 88097.62 Da
• Isoelectric Point: 4.8968

>NTDB_id=989334 AAG068_RS22125 WP_342715822.1 4273542..4275881(-) (recJ) [Bacillus paramycoides strain JYZ-SD5]
MLQPKTRWKEKEYNGERVSELASKLQLSPLVVSLFLGRGLDTEDKILDFLNTENQEFHDPFLLEGMDRTVERVNKAVQNG
EQILIFGDYDADGVSSTTVLYLALQELGADVEFYIPNRFTEGYGPNEEAFRWAHSAGFSLIITVDTGIAAVHEAKVAKEI
GIDLIITDHHEPPPELPEALAIIHPKLDGGVYPFHYLAGVGVAFKVAHALLGRVPEHLLEIAVIGTVADLVSLHGENRLL
VKRGLKHMRMTKNIGLKALFKVANVSQSEITEESIGFSIAPRINAVGRLEDATPAVHLLLSEDPEEAKELAEEIDELNKL
RKDIVKQITEEAIAEVENNFPPEENKVLVLAKEGWNPGVIGIVASKLVERFYRPTIVLSIDPVKETAKGSARSIAGFDLF
ANLSDCRELLPHFGGHPMAAGMTLHMNDVDELRRRLNEQADTILTEEDFIPITAVDVFCKVEDVTLAAIEDMQKLAPFGV
GNPKPRIAVKDADLESIRAIGSDGSHLKMALRDGQATLDTIGFGFGAYAKEISPVAKVSVIGEASINEWNNFKKPQLMVQ
DIAVEAWQLFDWRSMRNVEANVAELPKEKIKMVYFSEEVLNKFSLEDYKEYMMHASEVTQLDDQYVVFLDLPKGTDELRE
LFKVGFPSRIYTLFYQENNHLFSTVPTREHFKWYYSFLSQKAPFSLRQYGAQLCQHKGWSKDTVNFMTQVFFELEFVTIK
DGVIFMADKKQKRDLIESNTYREKMNHLQLEKELVYSTYQQLYTWFETIRNHKEVEQLG

Nucleotide

• Length: 2340 bp

>NTDB_id=989334 AAG068_RS22125 WP_342715822.1 4273542..4275881(-) (recJ) [Bacillus paramycoides strain JYZ-SD5]
GTGTTACAACCGAAGACGCGTTGGAAAGAAAAAGAATATAATGGCGAGCGAGTGAGTGAATTAGCAAGTAAATTACAATT
ATCACCACTTGTCGTTTCGTTATTCCTCGGCAGAGGATTAGATACAGAAGATAAGATTTTAGATTTTTTAAATACAGAAA
ATCAAGAATTTCATGATCCATTTTTATTAGAAGGAATGGATAGAACGGTAGAGCGTGTAAATAAGGCGGTTCAAAATGGA
GAGCAAATATTAATATTTGGTGACTACGATGCGGACGGAGTAAGTAGTACGACTGTTTTATATCTTGCCTTGCAAGAATT
AGGTGCAGACGTAGAATTTTATATCCCAAACCGTTTTACAGAAGGTTATGGACCAAACGAAGAAGCATTCCGTTGGGCGC
ATAGCGCAGGATTCTCACTAATTATTACTGTCGATACTGGTATCGCAGCGGTACACGAAGCGAAGGTAGCGAAGGAAATT
GGGATAGATCTTATTATTACGGATCACCATGAGCCACCACCGGAATTGCCAGAAGCACTTGCGATTATTCATCCGAAATT
AGATGGCGGTGTGTATCCGTTTCACTATTTAGCTGGTGTAGGTGTTGCGTTTAAAGTTGCACATGCACTATTAGGCCGTG
TACCAGAACATTTATTAGAAATTGCAGTAATTGGTACAGTAGCCGATTTAGTATCACTTCACGGTGAAAATAGATTGCTA
GTGAAGCGTGGTCTAAAACATATGCGCATGACGAAAAATATCGGACTAAAGGCGCTATTTAAAGTTGCTAACGTTTCGCA
AAGTGAAATTACAGAAGAGAGTATTGGCTTCTCAATTGCACCTCGTATTAATGCTGTTGGACGTTTAGAAGATGCTACGC
CAGCTGTACATCTTTTATTATCAGAGGATCCAGAAGAAGCGAAAGAGCTTGCTGAAGAAATTGATGAGTTGAACAAATTG
CGAAAAGATATTGTAAAGCAAATTACAGAAGAAGCTATCGCTGAAGTGGAAAATAATTTCCCGCCTGAAGAAAATAAAGT
GTTAGTGCTTGCAAAAGAAGGATGGAATCCGGGTGTCATTGGAATTGTCGCTTCTAAATTAGTTGAACGTTTTTATCGTC
CGACGATTGTATTAAGCATTGATCCTGTGAAAGAAACAGCGAAAGGTTCAGCACGTAGTATTGCAGGATTTGATTTGTTT
GCAAACTTGTCAGATTGTAGAGAGTTATTACCACACTTCGGGGGGCATCCGATGGCAGCGGGAATGACGCTACATATGAA
TGATGTAGATGAATTACGCCGCCGCTTAAATGAACAAGCAGATACAATTTTAACAGAAGAAGACTTTATTCCAATTACAG
CTGTTGATGTCTTTTGTAAAGTGGAGGATGTAACACTTGCAGCAATTGAAGATATGCAAAAGTTAGCGCCATTTGGTGTT
GGAAATCCAAAGCCACGTATTGCAGTGAAAGATGCAGATTTAGAAAGTATTCGTGCAATTGGATCAGACGGTTCACATTT
AAAAATGGCTCTTCGTGATGGACAAGCGACACTGGATACAATTGGATTTGGTTTTGGCGCGTATGCGAAAGAAATTTCTC
CAGTTGCAAAGGTATCTGTAATCGGGGAAGCGTCTATCAATGAATGGAATAATTTTAAGAAGCCGCAATTAATGGTGCAA
GATATTGCTGTAGAGGCATGGCAATTATTTGATTGGCGCAGTATGCGTAACGTAGAAGCGAATGTAGCAGAACTTCCAAA
AGAAAAGATAAAAATGGTGTATTTTTCTGAAGAGGTATTGAATAAATTTTCTTTAGAAGACTATAAAGAGTATATGATGC
ATGCATCAGAAGTTACGCAGTTAGATGATCAATACGTCGTGTTCCTTGATTTACCAAAAGGAACAGATGAATTACGAGAG
CTATTTAAAGTTGGGTTCCCATCGCGAATTTATACACTATTTTATCAAGAGAATAATCATTTATTTAGTACTGTTCCAAC
GAGAGAACACTTTAAATGGTACTATTCTTTCTTGAGCCAAAAAGCACCATTTTCTTTAAGACAATATGGAGCGCAACTAT
GCCAACATAAAGGTTGGTCAAAAGATACAGTAAATTTCATGACACAGGTGTTTTTTGAGTTAGAATTTGTTACAATAAAA
GATGGCGTCATTTTTATGGCAGACAAAAAACAAAAGCGTGATTTAATTGAATCGAACACATATCGTGAGAAAATGAACCA
CTTACAATTAGAAAAAGAATTGGTTTATAGCACATATCAGCAACTATATACATGGTTTGAAACGATTCGTAATCATAAAG
AAGTAGAACAGTTAGGGTAA

Domains

Predicted by InterproScan.

• DHH family (DHH) (82-226)

• DHHA1 domain (DHHA1) (315-439)

• RecJ OB domain (RecJ_OB) (455-561)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (568-766)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Bacillus subtilis subsp. subtilis str. 168	52.584	99.358	0.522