Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   ACNR93_RS08040 Genome accession   NZ_CP184736
Coordinates   1626164..1628500 (-) Length   778 a.a.
NCBI ID   WP_420543539.1    Uniprot ID   -
Organism   Streptococcus equinus strain NM-2-29     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1621164..1633500
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNR93_RS08015 (ACNR93_08015) - 1621599..1622096 (+) 498 WP_420543536.1 phosphatase PAP2 family protein -
  ACNR93_RS08020 (ACNR93_08020) nadC 1622167..1623027 (-) 861 WP_033153321.1 carboxylating nicotinate-nucleotide diphosphorylase -
  ACNR93_RS08025 (ACNR93_08025) - 1623056..1624360 (-) 1305 WP_420543537.1 L-aspartate oxidase -
  ACNR93_RS08030 (ACNR93_08030) nadA 1624614..1625534 (+) 921 WP_027968363.1 quinolinate synthase NadA -
  ACNR93_RS08035 (ACNR93_08035) - 1625609..1625908 (-) 300 WP_420543538.1 bacteriocin immunity protein -
  ACNR93_RS08040 (ACNR93_08040) mutS/mutS2 1626164..1628500 (-) 2337 WP_420543539.1 endonuclease MutS2 Machinery gene
  ACNR93_RS08045 (ACNR93_08045) - 1628609..1629157 (-) 549 WP_027968361.1 CvpA family protein -
  ACNR93_RS08050 (ACNR93_08050) - 1629163..1629471 (-) 309 WP_004233227.1 hypothetical protein -
  ACNR93_RS08055 (ACNR93_08055) rnhC 1629592..1630491 (+) 900 WP_420543540.1 ribonuclease HIII -
  ACNR93_RS08060 (ACNR93_08060) lepB 1630507..1631100 (+) 594 WP_033153332.1 signal peptidase I -

Sequence

Protein


Download         Length: 778 a.a.        Molecular weight: 87697.04 Da        Isoelectric Point: 6.6163

>NTDB_id=988927 ACNR93_RS08040 WP_420543539.1 1626164..1628500(-) (mutS/mutS2) [Streptococcus equinus strain NM-2-29]
MNNRILEQLEFDKVKQLFAGYLQTEQGQEELRKLSPMTEPDRISRSFDEMSDMEQIFIEQHGFGLGSLRDISESMRRLEL
DADVNVSEIIDIKKILQVSAEVKHFYNDLENVELHALNNLFEKIELLPSLQGSLQAINDGGFIENFASHELDRIRRQINH
DESRVRQVLQDILKKQADHLTETLIASRNGRAVLPVKNSYRNRISGVVHDISASGSTVYIEPRAVVQLNEEITQLRADER
HEMARILRELSNMLRPHTNIIRNNAWVLGHLDFVRAKFLFMQENKAVVPQLSTDKTVQLLQARHPLLTNPIANDLHFLDE
LTVIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSKVAVFNEIFADIGDEQSIEQSLSTFSSHMTNIVDILAAAD
KDSLVLVDELGAGTDPQEGASLAISILEHLRLTQVKTMATTHYPELKAYGIETEFVENASMEFDTETLSPTYHFMQGVPG
RSNAFEIARRLGLAEVIVNEAERLTDSDTDVNRIIERLEEQTHESRKRLDHIKEVEQDNLKFNRAVKKLYNEFSHAKDKE
LEKASAKAQEIVDKAMAESEEILKNLHHKASLKPHEVIEAKSQLKKLAPEVDLSKNKVLKKAKKLRAPRVGDDIIVTAYG
QRGTLINQTKNGKWEAQVGLIKMTLKEDEFSLVKVQEEAQKTKKKQVHVVKKSKKSAGPRARLDLRGKRYEEAMQELDEF
IDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGYAPQNAGGSGCTIANLG

Nucleotide


Download         Length: 2337 bp        

>NTDB_id=988927 ACNR93_RS08040 WP_420543539.1 1626164..1628500(-) (mutS/mutS2) [Streptococcus equinus strain NM-2-29]
ATGAATAACAGAATTTTAGAACAGTTAGAATTTGATAAGGTCAAGCAACTTTTTGCTGGCTATTTACAAACTGAGCAAGG
GCAGGAGGAATTACGTAAACTTTCTCCAATGACTGAACCAGATCGTATCTCACGTTCATTTGATGAAATGTCTGATATGG
AGCAGATCTTCATTGAGCAACACGGATTTGGTCTTGGCAGTTTGCGTGATATTTCTGAAAGTATGCGTCGCTTAGAATTG
GATGCTGATGTTAACGTTTCAGAGATTATCGACATTAAAAAAATCTTGCAAGTTTCTGCAGAAGTTAAGCATTTTTACAA
CGATTTAGAAAATGTTGAGCTGCATGCGCTCAATAATCTTTTTGAAAAAATCGAACTTTTACCAAGTCTGCAAGGTAGTC
TTCAAGCTATCAACGATGGCGGTTTTATTGAAAATTTTGCAAGTCATGAACTTGACCGTATTCGTCGTCAAATCAATCAT
GATGAAAGCCGTGTGCGTCAAGTCTTGCAAGATATTTTGAAAAAGCAAGCTGACCATTTGACAGAGACTTTGATTGCAAG
CCGTAATGGTCGTGCAGTTTTACCTGTGAAAAATAGCTACCGCAATCGTATTTCAGGGGTTGTGCATGATATTTCAGCAT
CAGGAAGCACTGTTTATATTGAGCCACGCGCCGTTGTCCAATTAAACGAAGAAATCACACAATTGCGCGCAGATGAACGT
CATGAAATGGCACGTATTTTGCGTGAGTTGTCAAATATGCTTCGTCCACATACTAATATTATTCGCAACAATGCTTGGGT
TCTAGGACACTTGGATTTTGTACGTGCGAAATTCCTTTTCATGCAAGAAAACAAAGCAGTCGTTCCACAATTATCCACAG
ATAAGACCGTTCAGCTCTTACAAGCCCGTCACCCACTATTGACAAATCCTATCGCAAATGACCTTCATTTCCTTGATGAA
TTGACCGTCATTGTCATCACTGGTCCAAATACTGGTGGTAAGACGGTTATGTTGAAAACTTTGGGATTAGCGCAGCTTAT
GGCACAATCAGGACTTCCAATCCTAGCTGACAAAGGTAGTAAAGTCGCTGTTTTCAATGAGATTTTCGCTGATATCGGTG
ATGAGCAATCTATCGAGCAAAGCTTGTCAACATTCTCAAGCCACATGACAAATATTGTGGATATTTTGGCAGCAGCTGAC
AAAGATAGTTTGGTACTTGTGGATGAATTGGGGGCAGGTACTGACCCGCAAGAAGGAGCTAGCCTTGCCATTTCAATCTT
GGAGCATTTGCGTTTGACACAAGTGAAAACCATGGCAACAACTCACTATCCTGAGCTAAAAGCTTACGGTATCGAGACAG
AGTTTGTTGAAAATGCCAGCATGGAATTTGACACAGAGACTTTGAGCCCGACTTATCATTTCATGCAAGGTGTGCCAGGA
CGCTCAAATGCCTTTGAAATCGCTCGTCGTTTAGGTCTTGCAGAAGTGATTGTCAACGAAGCAGAGCGTTTGACGGATTC
TGATACGGACGTTAACCGCATCATCGAACGTTTGGAAGAACAAACGCACGAAAGTCGCAAACGTCTTGACCATATCAAAG
AAGTTGAACAAGATAACCTTAAATTCAACCGTGCAGTCAAGAAACTTTACAATGAATTCTCACATGCAAAAGACAAAGAA
CTTGAAAAAGCTTCTGCTAAGGCACAAGAAATTGTGGATAAAGCCATGGCTGAAAGTGAAGAAATCCTTAAAAATCTTCA
CCACAAAGCAAGCCTTAAACCACACGAAGTCATTGAAGCTAAAAGTCAGTTGAAAAAATTGGCACCTGAAGTTGATTTGT
CGAAAAATAAAGTTCTTAAGAAAGCTAAGAAATTGCGCGCACCGCGCGTGGGTGATGATATTATCGTCACAGCTTATGGT
CAACGCGGAACCTTGATTAACCAAACGAAAAATGGTAAATGGGAAGCGCAAGTTGGTCTCATTAAGATGACGCTTAAAGA
AGACGAATTTAGCCTTGTCAAAGTTCAAGAAGAAGCGCAAAAAACTAAGAAAAAACAAGTTCATGTGGTTAAGAAAAGCA
AGAAATCAGCTGGACCACGTGCTCGACTTGACCTTCGTGGTAAACGTTATGAAGAAGCCATGCAAGAATTGGATGAATTT
ATCGACCAAGCCTTGCTTAACAACATGGCTCAAGTTGATATCATTCACGGTATCGGAACAGGTGTTATCCGTGAAGGGGT
CACAAAATACCTTCGTCGCAACAAGCACGTCAAATCATTCGGCTACGCCCCACAAAACGCAGGCGGCAGTGGCTGTACTA
TCGCAAATCTTGGTTAA

Domains

Predicted by InterProScan.

MutS domain V (MutS_V)

(324-505)

MutS2 and Smr-associated SH3 domain (MSSS)

(630-669)

Smr domain (Smr)

(703-776)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

41.646

100

0.423

Multiple sequence alignment