Detailed information    

insolico Bioinformatically predicted

Overview


Name   priA   Type   Machinery gene
Locus tag   ACNR93_RS02375 Genome accession   NZ_CP184736
Coordinates   452580..454970 (+) Length   796 a.a.
NCBI ID   WP_420543808.1    Uniprot ID   -
Organism   Streptococcus equinus strain NM-2-29     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 447580..459970
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNR93_RS02350 (ACNR93_02350) - 448240..449004 (+) 765 WP_074567267.1 (S)-acetoin forming diacetyl reductase -
  ACNR93_RS02355 (ACNR93_02355) - 449079..449564 (-) 486 WP_003067349.1 S-ribosylhomocysteine lyase -
  ACNR93_RS02360 (ACNR93_02360) - 449713..451320 (+) 1608 WP_021141782.1 ribonuclease Y -
  ACNR93_RS02365 (ACNR93_02365) gmk 451479..452096 (+) 618 WP_003063524.1 guanylate kinase -
  ACNR93_RS02370 (ACNR93_02370) rpoZ 452121..452435 (+) 315 WP_003067343.1 DNA-directed RNA polymerase subunit omega -
  ACNR93_RS02375 (ACNR93_02375) priA 452580..454970 (+) 2391 WP_420543808.1 primosomal protein N' Machinery gene
  ACNR93_RS02380 (ACNR93_02380) fmt 455031..455966 (+) 936 WP_024344647.1 methionyl-tRNA formyltransferase -
  ACNR93_RS02385 (ACNR93_02385) rsmB 455956..457278 (+) 1323 WP_420543809.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  ACNR93_RS02390 (ACNR93_02390) - 457316..458053 (+) 738 WP_024344649.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  ACNR93_RS02395 (ACNR93_02395) pknB 458053..459927 (+) 1875 WP_420543810.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator

Sequence


Protein


Download         Length: 796 a.a.        Molecular weight: 91249.03 Da        Isoelectric Point: 8.0669

>NTDB_id=988869 ACNR93_RS02375 WP_420543808.1 452580..454970(+) (priA) [Streptococcus equinus strain NM-2-29]
MVKIAQVIVDVPLMQTDKPFSYLVPDDMQDQIVLGSRVHVPFGRGNRLLQGFVVGFTENMQGQANQLKAICEVLDFEPVL
NEEQLKLAEQMRHTVFSYKISILKSMIPNLLNSQYDKKLIPSEDLSQEERLALFGEKESRLHSTLSEEEAKKVARLVQAG
KITVEYLAKDKKNIKTEKYYQVLSDKLAAAEISARAKKRLELQEYLLEHPDEGKLSDLHQLFSREVVKFFVENQLIKVIE
REKKRSDVYFDVATTKFLDLNDEQAAVVEKVTSQIGKDSKPFLLEGVTGSGKTEVYLHIIDKVLKLGKTAIVLVPEISLT
PQMTNRFISRFGKQVAIMHSALSDGEKFDEWRKIKSGQARVVVGARSAIFVPMENIGAIIIDEEHEATYKQESNPRYHAR
DVALLRAKYHKAVLLMGSATPSIESRARASRGVYQFLQLTHRANPLAKIPKVDIVDFRDYVGQQEVSNYTPYLLEKIADR
LEKREQVVLMLNRRGYSSFVMCRDCGYVDECPNCDISLTLHMDTKTMNCHYCGFEKAIPHTCPNCHSRSIRYYGTGTQKA
YDELKEVFPQARILRMDVDTTRKKGAHQQILDKFGNHEADILLGTQMIAKGLDFPNVTLVGVLNADTSLNLPDFRSSERT
FQLLTQVAGRAGRAEKEGEVLIQTYNPQHYAIKLAQKQDYEAFYAYEMGIRKQLSYPPYYFTVGLTLSHKDEQTVVRKSF
EILQLLRQHLSDKIKILGPTPKPIARTHNLYHYQIIIKYRFEDHLEEVLNYILDMTQLPENKDLRLVIDHEPQNFM

Nucleotide


Download         Length: 2391 bp        

>NTDB_id=988869 ACNR93_RS02375 WP_420543808.1 452580..454970(+) (priA) [Streptococcus equinus strain NM-2-29]
ATGGTAAAAATTGCCCAAGTTATCGTTGATGTTCCCTTGATGCAGACGGATAAGCCTTTTTCATATCTTGTCCCAGACGA
TATGCAAGACCAAATTGTTTTAGGGTCTCGTGTGCATGTTCCTTTTGGACGTGGCAATCGTCTCTTGCAAGGGTTCGTTG
TTGGCTTTACTGAGAATATGCAAGGTCAAGCTAACCAACTCAAGGCTATTTGTGAAGTTTTGGATTTTGAACCTGTTTTG
AATGAAGAACAACTTAAGCTAGCTGAGCAAATGCGCCATACTGTCTTTTCATATAAGATTTCAATTTTGAAATCAATGAT
TCCAAATCTCCTTAATTCTCAGTATGATAAAAAGCTGATTCCAAGCGAAGATTTGTCACAAGAAGAGAGATTAGCCTTAT
TTGGTGAAAAAGAGAGCCGTCTCCATTCAACTTTGTCAGAAGAAGAGGCTAAAAAAGTTGCACGGCTAGTTCAGGCTGGA
AAGATAACTGTAGAATATTTGGCAAAAGACAAAAAGAATATTAAGACAGAAAAATATTATCAAGTTCTGTCTGATAAACT
TGCAGCTGCCGAGATTTCAGCTCGTGCTAAGAAGCGTTTGGAGCTGCAAGAATATCTGCTTGAACACCCTGACGAAGGAA
AATTATCAGATTTGCATCAGCTATTTTCACGTGAAGTTGTCAAATTTTTTGTAGAAAATCAGCTGATTAAAGTCATTGAA
AGAGAGAAAAAACGTTCAGATGTCTATTTTGATGTTGCAACAACTAAGTTTCTTGATTTAAATGATGAACAAGCTGCAGT
TGTTGAAAAAGTTACAAGTCAAATTGGAAAAGACTCTAAACCTTTCTTGCTAGAAGGTGTGACAGGTTCAGGTAAAACTG
AAGTTTATCTTCATATCATTGATAAGGTTTTAAAGCTCGGCAAGACAGCCATTGTTTTGGTACCTGAGATTTCATTGACA
CCGCAGATGACGAATCGCTTTATTTCACGTTTTGGTAAGCAAGTGGCAATTATGCACTCAGCTTTATCTGATGGTGAAAA
ATTTGATGAATGGCGAAAAATCAAATCTGGACAAGCTCGAGTGGTTGTTGGTGCCAGATCGGCTATCTTTGTTCCGATGG
AAAATATTGGAGCCATCATTATCGATGAGGAACACGAGGCAACTTACAAGCAAGAATCTAATCCGCGTTATCATGCACGT
GATGTGGCCTTGCTACGGGCAAAATACCATAAAGCAGTTCTGTTAATGGGCTCTGCGACACCAAGCATTGAAAGTCGCGC
TAGGGCTAGCCGTGGCGTTTACCAATTTTTACAATTGACTCACCGTGCTAACCCGCTTGCTAAAATTCCAAAAGTGGACA
TTGTTGATTTTCGCGATTATGTTGGGCAACAAGAAGTCAGCAATTACACACCTTATCTCTTAGAAAAAATTGCTGACAGA
TTGGAAAAACGTGAGCAGGTCGTTCTCATGCTAAATCGCCGTGGGTATTCGAGCTTTGTCATGTGTCGTGATTGTGGTTA
CGTAGATGAGTGCCCAAATTGTGATATTTCATTGACACTTCATATGGATACAAAGACCATGAATTGTCACTATTGTGGTT
TTGAAAAAGCTATCCCACATACTTGTCCAAATTGTCATAGCCGCAGTATTCGTTACTATGGAACTGGGACTCAAAAAGCC
TACGATGAATTAAAAGAGGTTTTTCCGCAAGCTCGTATTTTACGAATGGATGTTGATACAACGCGCAAAAAAGGTGCTCA
TCAGCAAATCTTGGATAAATTTGGAAATCATGAAGCAGATATTCTACTTGGAACTCAAATGATTGCAAAAGGACTTGATT
TTCCAAATGTGACTTTAGTTGGGGTTTTAAATGCGGATACGTCTTTGAACTTGCCTGATTTTAGATCATCTGAGAGAACG
TTTCAATTGCTAACGCAGGTAGCAGGACGTGCAGGGCGTGCAGAAAAAGAAGGTGAAGTTCTCATTCAAACTTATAATCC
TCAGCACTATGCCATTAAGTTGGCTCAAAAGCAGGATTATGAAGCATTTTATGCTTATGAAATGGGAATTCGCAAGCAAT
TGTCTTATCCGCCATATTATTTTACGGTTGGTTTGACTTTATCGCATAAAGATGAGCAGACAGTTGTGCGCAAGTCTTTT
GAAATCTTGCAACTCTTGCGTCAGCATTTATCTGATAAAATCAAGATTTTGGGGCCAACACCTAAGCCGATTGCAAGAAC
GCATAATCTCTATCATTATCAGATTATTATTAAATATCGCTTTGAAGATCATTTAGAAGAGGTCTTGAATTACATTTTGG
ACATGACGCAATTACCTGAAAATAAAGATTTGCGACTTGTGATTGACCATGAGCCACAGAATTTTATGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Bacillus subtilis subsp. subtilis str. 168

48.459

100

0.494