Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | AAC934_RS12700 | Genome accession | NZ_CP152362 |
| Coordinates | 2478265..2479302 (-) | Length | 345 a.a. |
| NCBI ID | WP_342622981.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain LP | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2473265..2484302
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAC934_RS12650 (AAC934_12650) | tasA | 2473363..2474148 (-) | 786 | WP_015714250.1 | biofilm matrix protein TasA | - |
| AAC934_RS12655 (AAC934_12655) | sipW | 2474212..2474784 (-) | 573 | WP_003230181.1 | signal peptidase I | - |
| AAC934_RS12660 (AAC934_12660) | tapA | 2474768..2475529 (-) | 762 | WP_015714251.1 | amyloid fiber anchoring/assembly protein TapA | - |
| AAC934_RS12665 (AAC934_12665) | yqzG | 2475801..2476127 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| AAC934_RS12670 (AAC934_12670) | spoIIT | 2476169..2476348 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| AAC934_RS12675 (AAC934_12675) | comGG | 2476419..2476793 (-) | 375 | WP_015714252.1 | ComG operon protein ComGG | Machinery gene |
| AAC934_RS12680 (AAC934_12680) | comGF | 2476794..2477177 (-) | 384 | WP_038429292.1 | ComG operon protein ComGF | Machinery gene |
| AAC934_RS12685 (AAC934_12685) | comGE | 2477203..2477550 (-) | 348 | WP_015714254.1 | ComG operon protein 5 | Machinery gene |
| AAC934_RS12690 (AAC934_12690) | comGD | 2477534..2477965 (-) | 432 | WP_014480256.1 | comG operon protein ComGD | Machinery gene |
| AAC934_RS12695 (AAC934_12695) | comGC | 2477955..2478251 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| AAC934_RS12700 (AAC934_12700) | comGB | 2478265..2479302 (-) | 1038 | WP_342622981.1 | comG operon protein ComGB | Machinery gene |
| AAC934_RS12705 (AAC934_12705) | comGA | 2479289..2480359 (-) | 1071 | WP_015714258.1 | competence protein ComGA | Machinery gene |
| AAC934_RS12710 (AAC934_12710) | - | 2480621..2480770 (-) | 150 | WP_250540178.1 | hypothetical protein | - |
| AAC934_RS12715 (AAC934_12715) | corA | 2480772..2481725 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| AAC934_RS12720 (AAC934_12720) | yqhB | 2481868..2483193 (+) | 1326 | WP_198878632.1 | hemolysin family protein | - |
| AAC934_RS12725 (AAC934_12725) | rsbRD | 2483250..2484086 (-) | 837 | WP_342622984.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39794.30 Da Isoelectric Point: 9.6257
>NTDB_id=988621 AAC934_RS12700 WP_342622981.1 2478265..2479302(-) (comGB) [Bacillus subtilis strain LP]
MKKIRKVWSLKDQARLLKRLGEMTAGGYMLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDILFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIEAAICGSPFYEADFSKVIFHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYMLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDILFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIEAAICGSPFYEADFSKVIFHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=988621 AAC934_RS12700 WP_342622981.1 2478265..2479302(-) (comGB) [Bacillus subtilis strain LP]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGGGG
ATATATGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATACTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGTCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGGAAGCCCTTTTTATGAAGCTGATTTTTCAAAAGTCATATTTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGGGG
ATATATGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATACTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGTCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGGAAGCCCTTTTTATGAAGCTGATTTTTCAAAAGTCATATTTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
97.523 |
93.623 |
0.913 |