Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   KNP07_RS02075 Genome accession   NZ_CP152075
Coordinates   441537..441944 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain NCTR 501     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 436537..446944
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KNP07_RS02045 (KNP07_02045) - 436585..437589 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  KNP07_RS02050 (KNP07_02050) pyrR 437613..438125 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  KNP07_RS02055 (KNP07_02055) ruvX 438237..438671 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  KNP07_RS02060 (KNP07_02060) - 438671..439240 (-) 570 WP_003084577.1 YqgE/AlgH family protein -
  KNP07_RS02065 (KNP07_02065) - 439289..440182 (-) 894 WP_023098363.1 energy transducer TonB -
  KNP07_RS02070 (KNP07_02070) gshB 440329..441282 (-) 954 WP_003100943.1 glutathione synthase -
  KNP07_RS02075 (KNP07_02075) pilG 441537..441944 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  KNP07_RS02080 (KNP07_02080) pilH 441991..442356 (+) 366 WP_003084587.1 twitching motility response regulator PilH -
  KNP07_RS02085 (KNP07_02085) - 442407..442943 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  KNP07_RS02090 (KNP07_02090) pilJ 443028..445076 (+) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  KNP07_RS02095 (KNP07_02095) pilK 445137..446012 (+) 876 WP_003084594.1 type 4 fimbrial methyltransferase PilK -

Sequence


Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=987188 KNP07_RS02075 WP_003084583.1 441537..441944(+) (pilG) [Pseudomonas aeruginosa strain NCTR 501]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=987188 KNP07_RS02075 WP_003084583.1 441537..441944(+) (pilG) [Pseudomonas aeruginosa strain NCTR 501]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704

  vicR Streptococcus mutans UA159

44.444

86.667

0.385


Multiple sequence alignment