Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   MHB69_RS15210 Genome accession   NZ_CP152043
Coordinates   2888968..2889609 (-) Length   213 a.a.
NCBI ID   WP_034282566.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-0994     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2883968..2894609
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHB69_RS15175 (MHB69_15175) - 2885094..2885525 (+) 432 WP_024423315.1 Na(+)/H(+) antiporter subunit B -
  MHB69_RS15180 (MHB69_15180) - 2885525..2885866 (+) 342 WP_024423316.1 Na(+)/H(+) antiporter subunit C -
  MHB69_RS15185 (MHB69_15185) - 2885859..2887337 (+) 1479 WP_034282562.1 Na+/H+ antiporter subunit D -
  MHB69_RS15190 (MHB69_15190) - 2887344..2887823 (+) 480 WP_024425941.1 Na+/H+ antiporter subunit E -
  MHB69_RS15195 (MHB69_15195) - 2887823..2888104 (+) 282 WP_024425942.1 Na(+)/H(+) antiporter subunit F1 -
  MHB69_RS15200 (MHB69_15200) mnhG 2888088..2888462 (+) 375 WP_024423320.1 monovalent cation/H(+) antiporter subunit G -
  MHB69_RS15205 (MHB69_15205) - 2888555..2888944 (-) 390 WP_024423321.1 hotdog fold thioesterase -
  MHB69_RS15210 (MHB69_15210) comA 2888968..2889609 (-) 642 WP_034282566.1 response regulator transcription factor Regulator
  MHB69_RS15215 (MHB69_15215) comP 2889690..2891996 (-) 2307 WP_339240207.1 ATP-binding protein Regulator
  MHB69_RS15220 (MHB69_15220) comX 2892010..2892189 (-) 180 WP_313960228.1 competence pheromone ComX -
  MHB69_RS15225 (MHB69_15225) - 2892158..2893081 (-) 924 WP_342495740.1 polyprenyl synthetase family protein -
  MHB69_RS15230 (MHB69_15230) degQ 2893233..2893373 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  MHB69_RS15235 (MHB69_15235) - 2893879..2894235 (+) 357 WP_061110019.1 hypothetical protein -

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 24163.56 Da        Isoelectric Point: 4.6397

>NTDB_id=986562 MHB69_RS15210 WP_034282566.1 2888968..2889609(-) (comA) [Bacillus sp. FSL K6-0994]
MKKILVIDDHPAVMEGTKSILESDQQLSVDCLSPDAEAAFLKTHDFSIYDVILMDLNLGDINGMDIAKQILETNHQVKII
IYTGYEVDDYFEEAIRAGLHGAISKTETKDKIIEYIHRTLQGEVVIQLSYLKKLISQQQEKPEQAQQTDHELLTERECLI
LREVEKGYTNQEIADVLHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSESVL

Nucleotide


Download         Length: 642 bp        

>NTDB_id=986562 MHB69_RS15210 WP_034282566.1 2888968..2889609(-) (comA) [Bacillus sp. FSL K6-0994]
ATGAAGAAGATATTGGTCATTGATGATCATCCGGCTGTCATGGAAGGGACAAAAAGCATATTAGAATCAGACCAGCAGCT
ATCAGTCGATTGTTTAAGTCCTGATGCAGAAGCCGCCTTTTTAAAGACGCATGACTTTTCCATCTATGATGTGATTTTAA
TGGATTTAAATCTCGGGGATATCAATGGAATGGACATTGCGAAACAAATTTTAGAAACCAACCATCAAGTGAAAATTATC
ATTTATACAGGGTATGAAGTAGATGATTATTTTGAAGAGGCTATTCGGGCTGGATTACACGGTGCAATTAGTAAAACAGA
GACGAAAGACAAAATTATTGAATACATACACCGCACATTGCAAGGGGAAGTTGTCATTCAGCTGTCCTATTTAAAGAAAT
TAATTTCACAGCAGCAAGAAAAGCCAGAACAGGCGCAGCAGACTGATCACGAGCTCTTAACCGAACGGGAGTGTTTGATC
CTTAGAGAAGTGGAAAAAGGATACACGAACCAGGAGATTGCCGATGTGCTTCATTTGAGCAAACGGTCAATTGAGTACAG
TTTGACATCCATCTTTAATAAGCTGAATGTTGGATCTCGTACAGAAGCGGTGTTAATTGCCAAGTCTGAAAGTGTGCTGT
AA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(152-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

71.495

100

0.718

Multiple sequence alignment