Detailed information
Bioinformatically predicted
Overview
| Name | rarA | Type | Machinery gene |
| Locus tag | ACOCJB_RS02315 | Genome accession | NZ_CP184557 |
| Coordinates | 422265..423539 (-) | Length | 424 a.a. |
| NCBI ID | WP_000102740.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain SCTW2018482 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 417265..428539
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACOCJB_RS02290 (ACOCJB_02290) | hisS | 417826..419088 (+) | 1263 | WP_000590826.1 | histidine--tRNA ligase | - |
| ACOCJB_RS02295 (ACOCJB_02295) | aspS | 419104..420870 (+) | 1767 | WP_000044794.1 | aspartate--tRNA ligase | - |
| ACOCJB_RS02305 (ACOCJB_02305) | - | 421203..421331 (+) | 129 | WP_014937034.1 | hypothetical protein | - |
| ACOCJB_RS02310 (ACOCJB_02310) | - | 421331..422104 (+) | 774 | WP_000682648.1 | tRNA threonylcarbamoyladenosine dehydratase | - |
| ACOCJB_RS02315 (ACOCJB_02315) | rarA | 422265..423539 (-) | 1275 | WP_000102740.1 | replication-associated recombination protein A | Machinery gene |
| ACOCJB_RS02320 (ACOCJB_02320) | cymR | 423624..424046 (+) | 423 | WP_000704122.1 | cysteine metabolism transcriptional regulator CymR | - |
| ACOCJB_RS02325 (ACOCJB_02325) | - | 424146..424328 (+) | 183 | WP_000752909.1 | CsbD family protein | - |
| ACOCJB_RS02330 (ACOCJB_02330) | - | 424368..424514 (+) | 147 | WP_000009235.1 | SAS049 family protein | - |
| ACOCJB_RS02335 (ACOCJB_02335) | - | 424751..425764 (-) | 1014 | WP_000985891.1 | LLM class flavin-dependent oxidoreductase | - |
| ACOCJB_RS02340 (ACOCJB_02340) | - | 426076..427218 (+) | 1143 | WP_000409167.1 | cysteine desulfurase family protein | - |
| ACOCJB_RS02345 (ACOCJB_02345) | mnmA | 427219..428337 (+) | 1119 | WP_000066097.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
Sequence
Protein
Download Length: 424 a.a. Molecular weight: 47264.84 Da Isoelectric Point: 8.3539
>NTDB_id=986562 ACOCJB_RS02315 WP_000102740.1 422265..423539(-) (rarA) [Staphylococcus aureus strain SCTW2018482]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDEENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDEENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP
Nucleotide
Download Length: 1275 bp
>NTDB_id=986562 ACOCJB_RS02315 WP_000102740.1 422265..423539(-) (rarA) [Staphylococcus aureus strain SCTW2018482]
GTGAGTACAGAACCATTAGCGTCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACACTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGACACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACACAATATAAATTTAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATCCATCGACTAGATAAAGC
CAAACAAGATTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTAATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTCGAGTTATATCCTTTAAATGACGAAGATGTTCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGAAGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCTATGACCTACTTTTC
TACACAAAGTCAAGGTGATGTTCGTAGTGCGCTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAGGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGCTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATCCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAATTTACTTAAACAAAGGCCATAA
GTGAGTACAGAACCATTAGCGTCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACACTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGACACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACACAATATAAATTTAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATCCATCGACTAGATAAAGC
CAAACAAGATTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTAATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTCGAGTTATATCCTTTAAATGACGAAGATGTTCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGAAGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCTATGACCTACTTTTC
TACACAAAGTCAAGGTGATGTTCGTAGTGCGCTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAGGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGCTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATCCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAATTTACTTAAACAAAGGCCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rarA | Bacillus subtilis subsp. subtilis str. 168 |
69.286 |
99.057 |
0.686 |