Detailed information    

insolico Bioinformatically predicted

Overview


Name   recJ   Type   Machinery gene
Locus tag   MHI60_RS14020 Genome accession   NZ_CP152032
Coordinates   2755512..2757836 (+) Length   774 a.a.
NCBI ID   WP_144484778.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-3200     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2750512..2762836
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI60_RS14000 (MHI60_14000) - 2751738..2752034 (+) 297 WP_003216788.1 post-transcriptional regulator -
  MHI60_RS14005 (MHI60_14005) secDF 2752076..2754304 (+) 2229 WP_144471246.1 protein translocase subunit SecDF -
  MHI60_RS14010 (MHI60_14010) - 2754490..2754978 (+) 489 WP_041115109.1 cation:proton antiporter regulatory subunit -
  MHI60_RS14015 (MHI60_14015) - 2755080..2755430 (+) 351 WP_144484780.1 lipopolysaccharide assembly protein LapA domain-containing protein -
  MHI60_RS14020 (MHI60_14020) recJ 2755512..2757836 (+) 2325 WP_144484778.1 single-stranded-DNA-specific exonuclease RecJ Machinery gene
  MHI60_RS14025 (MHI60_14025) - 2757860..2758372 (+) 513 WP_144484776.1 adenine phosphoribosyltransferase -
  MHI60_RS14030 (MHI60_14030) - 2758515..2760725 (+) 2211 WP_047203353.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -
  MHI60_RS14035 (MHI60_14035) dtd 2760744..2761187 (+) 444 WP_095409179.1 D-aminoacyl-tRNA deacylase -

Sequence


Protein


Download         Length: 774 a.a.        Molecular weight: 87091.73 Da        Isoelectric Point: 5.0201

>NTDB_id=985901 MHI60_RS14020 WP_144484778.1 2755512..2757836(+) (recJ) [Bacillus sp. FSL K6-3200]
MLLSKMRWEYEHPSEEKVKSLSENLNISALTASLLVKRGLEEVEEARSFLFDQKAEFHDPFLLKGMKEAVERINKAIEEQ
ESIVIFGDYDADGVTSTSVLLHTLKERSAIVDFYIPDRFKEGYGPNEQAFRYIKEQGASLVITVDTGIAAVNEARIAKEI
GLDLIITDHHEPSEELPEALAIVHPKQPGCEYPFKELAGVGVAFKVAHALLGKLPVQLLDLAAIGTIADLVPLHDENRWL
AKKGLVQLRQTNRPGLKALLKEAGATLEEANEETVGFQIAPRLNAVGRIEQADPAVHLLMTEDKDEAEELARFVQELNKE
RQKIVSTITEEAIQLVEEADDDQSAIVVAKAGWNPGVVGIVASKLTDTFSRPAIVLGIDEETQMAKGSARSIPGFDLFFH
LSKCRDILPHFGGHPMAAGMTLRADDVDLLRERLNQYANETLTKEDFIPIQRVDAVCKVDELTVEAIEEAGMLSPFGMSN
PKPFIMIEDAKLEDIRTIGANHNHIKMSLKDDDKLLDCVGFHQGKLKEEIVPGSRISVIGEMSVNEWNNRKKPQLMLKDA
RVDEWQLFDLRGKKDWEKKVSTLDSEKSLIVCFDEATKQDVDIPIHHVHAENVSSFNVHGKYVVFADVPADEQLLKQLLE
NQKPARIYTVFQRKEDHFMSSFPSRDQFKWFYGFLFKRGSFPIKEQGMELAKHRGWTKDTIIFMTKVFFELGFVKIENGV
LSIVLDAPKKDLTASASYTAKQRLMELDQTLTYSSAKELKEWLNSMMSEVSPVL

Nucleotide


Download         Length: 2325 bp        

>NTDB_id=985901 MHI60_RS14020 WP_144484778.1 2755512..2757836(+) (recJ) [Bacillus sp. FSL K6-3200]
ATGTTATTATCCAAAATGCGCTGGGAATATGAACATCCAAGCGAAGAAAAAGTGAAATCACTCTCTGAAAATCTGAATAT
TTCAGCGCTGACTGCATCGCTTCTCGTAAAAAGAGGACTTGAAGAAGTAGAAGAGGCGAGGTCTTTTTTATTTGATCAAA
AAGCCGAATTTCATGATCCATTCCTATTAAAAGGAATGAAAGAAGCAGTAGAGCGCATCAACAAAGCGATCGAAGAACAG
GAATCGATTGTGATCTTCGGAGACTATGATGCAGATGGTGTGACAAGTACGTCTGTACTTTTACATACATTAAAAGAGCG
GTCTGCGATAGTAGACTTTTATATTCCAGATCGATTTAAAGAAGGCTATGGGCCTAATGAACAGGCATTTCGATATATCA
AGGAGCAAGGAGCATCGCTTGTCATCACGGTCGATACAGGCATTGCTGCTGTCAATGAAGCACGTATTGCAAAAGAAATA
GGGTTAGACCTAATCATTACAGATCACCATGAACCAAGTGAGGAGCTGCCTGAGGCACTTGCCATTGTCCATCCTAAGCA
GCCGGGCTGTGAGTATCCCTTTAAAGAACTTGCTGGTGTAGGTGTCGCGTTTAAAGTGGCGCATGCACTTCTTGGGAAGC
TGCCAGTTCAGCTGTTAGATCTTGCAGCAATCGGGACAATCGCGGATCTTGTACCGCTTCATGATGAGAATAGGTGGCTC
GCCAAAAAAGGTCTTGTGCAGCTTCGACAGACGAATAGACCGGGGCTGAAAGCGTTATTGAAAGAAGCGGGAGCCACTCT
AGAAGAAGCCAATGAGGAAACGGTCGGCTTTCAAATTGCGCCAAGGCTGAATGCTGTTGGGCGAATTGAACAGGCAGATC
CAGCCGTTCATCTTCTTATGACTGAGGATAAGGATGAAGCAGAAGAGCTCGCTCGTTTTGTACAGGAACTGAATAAAGAA
CGACAAAAGATTGTCAGTACGATCACAGAAGAAGCGATTCAATTGGTGGAAGAGGCAGATGATGACCAGTCTGCGATCGT
TGTAGCGAAAGCTGGATGGAATCCGGGCGTTGTCGGAATTGTTGCCTCTAAATTGACGGATACTTTCTCTCGTCCAGCGA
TTGTACTTGGAATAGATGAAGAGACGCAAATGGCAAAAGGATCAGCCCGGAGTATTCCTGGCTTCGATCTATTTTTCCAT
CTAAGCAAATGCCGCGACATCCTGCCGCATTTCGGCGGGCATCCGATGGCAGCAGGGATGACACTTCGAGCGGATGATGT
CGATTTACTAAGGGAAAGATTAAATCAATATGCAAATGAAACATTGACGAAAGAAGATTTTATTCCAATCCAGCGAGTCG
ATGCAGTGTGTAAGGTAGACGAATTGACGGTTGAAGCGATTGAAGAAGCGGGGATGCTGTCGCCATTCGGTATGTCAAAC
CCAAAACCGTTCATTATGATTGAAGATGCGAAGCTTGAAGATATCCGAACGATTGGGGCAAATCACAACCATATTAAAAT
GTCTCTGAAAGACGATGACAAGCTGCTTGATTGTGTCGGTTTTCACCAAGGGAAATTAAAAGAAGAAATTGTTCCAGGAA
GCCGCATTTCCGTGATTGGTGAAATGTCCGTCAATGAATGGAATAACCGGAAGAAGCCCCAGCTGATGCTAAAAGATGCA
CGAGTTGATGAATGGCAGCTGTTTGATCTGCGTGGGAAAAAGGATTGGGAGAAAAAAGTTTCGACGCTTGATTCAGAAAA
ATCTTTGATTGTCTGTTTTGATGAAGCAACAAAACAGGACGTCGATATCCCTATTCATCATGTTCATGCAGAAAATGTAT
CATCGTTTAATGTACACGGAAAATATGTGGTCTTTGCGGATGTTCCCGCAGATGAGCAATTGCTGAAGCAGCTTTTAGAA
AACCAAAAGCCTGCCAGAATATATACGGTTTTTCAAAGAAAAGAAGATCATTTTATGTCCTCTTTCCCAAGCCGTGACCA
ATTCAAATGGTTTTATGGGTTCTTGTTTAAACGGGGAAGTTTTCCTATCAAAGAACAAGGAATGGAGCTTGCCAAACATA
GAGGCTGGACAAAAGATACAATCATTTTTATGACAAAGGTGTTTTTTGAACTCGGTTTTGTTAAAATAGAGAATGGTGTG
CTGTCAATAGTACTTGATGCCCCTAAAAAAGATTTAACGGCATCAGCGTCCTATACAGCAAAACAACGATTGATGGAACT
CGATCAAACACTAACATATTCCTCAGCTAAAGAGCTGAAGGAATGGCTGAATAGCATGATGAGCGAAGTCTCACCTGTGC
TTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recJ Bacillus subtilis subsp. subtilis str. 168

67.181

100

0.674


Multiple sequence alignment