Detailed information NTG0985800

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: MHH54_RS12330
• Genome accession: NZ_CP152030
• Coordinates: 2430980..2433364 (-)
• Length: 794 a.a.
• NCBI ID: WP_342500294.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL K6-4563
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2425980..2438364

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MHH54_RS12295 (MHH54_12295)	-	2427042..2427770 (+)	729	WP_003216774.1	amino acid ABC transporter ATP-binding protein	-
MHH54_RS12300 (MHH54_12300)	-	2427784..2428593 (+)	810	WP_050943676.1	transporter substrate-binding domain-containing protein	-
MHH54_RS12305 (MHH54_12305)	-	2428674..2429327 (+)	654	WP_003216507.1	amino acid ABC transporter permease	-
MHH54_RS12310 (MHH54_12310)	-	2429343..2429993 (+)	651	WP_003216394.1	amino acid ABC transporter permease	-
MHH54_RS12315 (MHH54_12315)	-	2430029..2430160 (-)	132	WP_003216198.1	YrzQ family protein	-
MHH54_RS12320 (MHH54_12320)	-	2430181..2430372 (-)	192	WP_003216308.1	hypothetical protein	-
MHH54_RS12325 (MHH54_12325)	-	2430386..2430844 (-)	459	WP_342500293.1	prc-barrel domain-containing protein	-
MHH54_RS12330 (MHH54_12330)	recD2	2430980..2433364 (-)	2385	WP_342500294.1	ATP-dependent RecD-like DNA helicase	Machinery gene
MHH54_RS12335 (MHH54_12335)	-	2433384..2434037 (-)	654	WP_003216571.1	tetratricopeptide repeat protein	-
MHH54_RS12340 (MHH54_12340)	mnmA	2434098..2435216 (-)	1119	WP_003216305.1	tRNA 2-thiouridine(34) synthase MnmA	-
MHH54_RS12345 (MHH54_12345)	-	2435312..2436454 (-)	1143	WP_106029090.1	cysteine desulfurase family protein	-
MHH54_RS12350 (MHH54_12350)	-	2436473..2436892 (-)	420	WP_034620651.1	Rrf2 family transcriptional regulator	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89045.58 Da
• Isoelectric Point: 5.1580

>NTDB_id=985800 MHH54_RS12330 WP_342500294.1 2430980..2433364(-) (recD2) [Bacillus sp. FSL K6-4563]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGQLGSQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNEYKVTEMDVANQIIALGEGKEMIIEDERCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASQAVPAVTLTDIYRQADGSSIVELAHDMKNGVLPKDITARSKDRSFIKCSVDQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEEVMDAELAALQKELPFSVHDANIGMEGITPFDFMYE

Nucleotide

• Length: 2385 bp

>NTDB_id=985800 MHH54_RS12330 WP_342500294.1 2430980..2433364(-) (recD2) [Bacillus sp. FSL K6-4563]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCATTTTTAAAGGGGACAGTTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTGAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAAGAAACTTACACCTTCTATGGCAAAGTCACAAGTCACCCGAAATTTGGTGAA
CAGTTTCAGGCGACTCATTTTCAAAAGGAAGTACCGACAACAAAGCAAGGAATCATTCATTATCTCTCAAGTGATTTATT
CGAAGGGATAGGGAAAAAGACGGCGGAAGAAATTGTGGGGCAGCTTGGCAGTCAGACGCTTCATAAAATTATGCGTGACC
CAGCTGTTTTGTATGACGTTCCGCGCTTATCAAAAAAGAAGGCAGATAAGCTGGCCGCAGCGCTCCAGGAGCATCAAGGA
TTGGAACAAATCATGATCAGCCTGAATCAATATGGCTTTGGTCCACAGCTCAGCATGAAGATATATCAAGTGTACGAGAG
TGAAACGCTGCAGAAGATTGAAGAAAACCCTTATCAGCTCGTCAAGGATGTCGAAGGGATCGGATTTATTAAGGCGGATG
AACTTGGCGCTAGAACCGGCATCTCAGGAAATGATCCAGAGCGAATCCGTGCAGCCTTGCTTTATACAGTGGAGACAGCC
AGCCTTCAGGACGGTCATACGTACATACAAACAAAGGATTTGATCGTCGAAACCCGAAAACTGCTCAATCAGACAGGCAA
TGAGTACAAAGTGACGGAAATGGACGTCGCCAATCAGATCATTGCACTTGGCGAAGGGAAAGAGATGATCATTGAAGATG
AGCGCTGCTATCATCCGTCCTTATTTTATGCCGAGCAGAGTGTCGCCAAACGTATACAAAAAATCGTCTCCCAAACGGAA
TATGCAGACCAATTCCCTGAATCAGAATTCCTTCTAGCCCTTGGTGAGCTAGAGGAACGGCTGGGTGTCCAGTATGCACC
GACACAAAAAGAAGCGATTCAAAAGGCGCTCATGTCCCCAATGCTGCTTTTAACAGGCGGACCTGGGACTGGGAAGACAA
CAGTCATTAAAGGGATTGTTGAGCTTTACAGCGATCTTCACGGTGTATCTCTTGATCCGAGTGATTACAAAAAAGATGAA
TCCTTTCCATTTGTGCTTGCGGCGCCAACTGGACGAGCAGCTAAACGAATGACAGAATCAACAGGGCTTCCAGCTGTGAC
GATTCACCGGCTGCTTGGTTGGAATGGGTCAGAGGGATTCTCGCATGATGAAGAACAGCCGATTGAAGGAAAGCTTGTCA
TTATTGATGAATCAAGTATGCTAGATATTTGGCTTGCGAATCACTTGTTTAAGGCCATTCCTGACCATATCCAAGTGATC
ATGGTGGGGGATGAACATCAGCTTCCGTCTGTCGGACCAGGCCAAGTGTTAAGAGACTTGCTTGCATCACAAGCTGTGCC
AGCTGTTACCCTGACAGATATTTACCGTCAGGCAGACGGCTCCAGCATTGTTGAGCTTGCACATGATATGAAAAATGGCG
TCCTGCCAAAGGATATTACCGCACGTTCAAAGGATCGATCTTTCATAAAATGCTCAGTTGATCAAATGAAAGAAGTGATT
GAGAAAGTCGTCAGCAATGCTGCTCAAAAAGGCTATTCAGCTAAAGACATTCAAGTGCTTGCGCCCATGTATAAAGGAAA
AGCAGGCATTAATGAGCTCAATAAAATGCTGCAGCACATTTTAAATCCTAAAAAACCAAAGGGCAGAGAAATCCCGTTTG
GTGATGTGGTGTACCGGACCGGTGATAAAGTGCTTCAGCTTGTGAATCAGCCGGAGAACAATATTTTTAACGGTGATATT
GGCGAAATTGTCTCGATTTTTTATGCGAAAGAAAACACGGAAAAAGAAGACATGGCTGTGATCTCCTTTGATGGGAATGA
AATTACCTTTACAAAAAAGGATTTTCATCAATTTACACATGCCTATTGCTGCTCCATCCACAAATCACAAGGCAGTGAAT
TCCCCATCGTTGTGCTTCCAGTCGTGAGAAGCTACTACAGAATGCTTCGGCGAAATCTGCTGTACACAGCCATTACACGA
AGTAAAAAGTTTTTAATTCTGTGCGGCGAGGAATCAGCACTGGAGTGGGGCGTGAAAAACAATGAGGATTCGCTCAGACA
AACGTCCTTAACGATGCGGCTCGTGCAAACCGAAGAGGTTATGGATGCGGAGCTTGCAGCACTTCAAAAAGAACTGCCGT
TTAGCGTGCATGATGCAAATATCGGTATGGAGGGAATCACTCCATTTGATTTTATGTATGAATAA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• AAA domain (AAA_30) (345-552)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	80.276	100	0.805