Detailed information NTG0985705

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ACOAKG_RS07525
• Genome accession: NZ_CP184261
• Coordinates: 1724425..1725780 (-)
• Length: 451 a.a.
• NCBI ID: WP_330353236.1
• Uniprot ID: -
• Organism: Streptomyces sp. JL3001
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1719425..1730780

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACOAKG_RS07505 (ACOAKG_07505)	-	1720348..1720695 (-)	348	WP_030952626.1	hypothetical protein	-
ACOAKG_RS07510 (ACOAKG_07510)	-	1720712..1721149 (-)	438	WP_093745335.1	DUF948 domain-containing protein	-
ACOAKG_RS07515 (ACOAKG_07515)	-	1721313..1723499 (+)	2187	WP_420076081.1	ATP-binding protein	-
ACOAKG_RS07520 (ACOAKG_07520)	rpsD	1723529..1724143 (-)	615	WP_015661793.1	30S ribosomal protein S4	-
ACOAKG_RS07525 (ACOAKG_07525)	rarA	1724425..1725780 (-)	1356	WP_330353236.1	replication-associated recombination protein A	Machinery gene
ACOAKG_RS07530 (ACOAKG_07530)	-	1725837..1726493 (-)	657	WP_107909364.1	vitamin K epoxide reductase family protein	-
ACOAKG_RS07535 (ACOAKG_07535)	hisS	1726679..1727941 (-)	1263	WP_030945286.1	histidine--tRNA ligase	-
ACOAKG_RS07540 (ACOAKG_07540)	-	1727953..1728660 (-)	708	WP_330353237.1	MBL fold metallo-hydrolase	-
ACOAKG_RS07545 (ACOAKG_07545)	-	1728841..1729662 (+)	822	WP_330353238.1	peptidylprolyl isomerase	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 48463.76 Da
• Isoelectric Point: 5.9566

>NTDB_id=985705 ACOAKG_RS07525 WP_330353236.1 1724425..1725780(-) (rarA) [Streptomyces sp. JL3001]
MEPDLFTAAAEERQEKDPAGSPLAVRMRPRTLDEVVGQQHLLKPGSPLRRLVGESGGGPAGPSSVILWGPPGTGKTTLAY
VVSKATNKRFVELSAITAGVKEVRAVIEGARRATGGYGKETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SVISPLLSRSLLLTLEPLTDDDVRGLLRRALSDERGLKDSVGLPEDTEEHLLRIAGGDARRALTALEAAAGAALDQDESE
ISLQTLEQTVDRAAVKYDRDGDQHYDVASALIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMISASEDIGLADPNAL
PIAVAAAQAVAMIGFPEAALTLSHATIALALAPKSNSATTAIGAAMDDVRKGMAGPVPPHLRDGHYKGAAKLGHAQGYVY
PHDLTEGIAEQQYAPDALKDREYYTPTRHGAEARYADAVEWTRQHLGRKRS

Nucleotide

• Length: 1356 bp

>NTDB_id=985705 ACOAKG_RS07525 WP_330353236.1 1724425..1725780(-) (rarA) [Streptomyces sp. JL3001]
GTGGAGCCCGACCTGTTCACCGCCGCCGCCGAAGAACGCCAGGAGAAGGACCCAGCCGGGAGTCCCCTGGCCGTGCGCAT
GCGCCCGCGCACCCTGGACGAGGTGGTGGGCCAGCAGCACCTGCTGAAACCGGGCTCACCGCTGCGCCGACTCGTGGGCG
AGTCCGGCGGCGGCCCCGCCGGACCGTCCTCGGTGATCCTCTGGGGCCCGCCCGGCACCGGCAAGACCACCCTGGCCTAC
GTCGTCTCCAAGGCCACCAACAAGCGCTTCGTCGAGCTCTCCGCGATCACCGCCGGCGTCAAGGAGGTCCGCGCGGTCAT
CGAAGGCGCCCGCCGCGCCACCGGCGGCTACGGCAAGGAGACCGTCCTCTTCCTCGACGAGATCCACCGCTTCAGCAAGG
CCCAGCAGGACTCCCTCCTCCCGGCGGTCGAGAACCGCTGGGTGACCCTGATCGCGGCGACCACCGAGAACCCGTACTTC
TCGGTCATCTCGCCCCTGCTCTCCCGCTCCCTCCTGCTCACCCTCGAACCCCTCACCGACGACGACGTCAGGGGCCTGCT
GCGCAGGGCACTGAGCGACGAGCGCGGCCTGAAGGACTCCGTCGGCCTCCCCGAGGACACCGAGGAGCACCTGCTGCGGA
TCGCCGGCGGCGACGCCCGCCGCGCCCTGACGGCCCTGGAAGCCGCCGCGGGAGCCGCCCTGGACCAGGACGAGAGCGAG
ATCAGCCTCCAGACGCTGGAGCAGACCGTCGACCGCGCCGCCGTGAAGTACGACCGCGACGGCGACCAGCACTACGACGT
GGCCAGCGCCCTCATCAAGTCCATCCGCGGCTCCGACGTCGACGCCGCCCTGCACTACCTGGCCCGGATGATCGAGGCCG
GTGAGGACCCCCGCTTCATCGCCCGCCGCCTGATGATCTCCGCCAGCGAGGACATCGGCCTCGCCGACCCGAACGCCCTG
CCGATCGCGGTCGCCGCGGCCCAGGCCGTCGCCATGATCGGCTTCCCCGAGGCCGCCCTCACCCTCAGCCATGCCACCAT
CGCCCTCGCGCTGGCCCCCAAGTCCAACTCCGCGACGACGGCGATCGGCGCCGCGATGGACGACGTACGCAAGGGAATGG
CGGGCCCGGTGCCCCCGCACCTGCGCGACGGGCACTACAAGGGCGCCGCCAAGCTGGGGCACGCCCAGGGGTACGTGTAT
CCGCACGACCTGACCGAGGGCATCGCCGAGCAGCAGTACGCCCCGGACGCCCTCAAGGACCGCGAGTACTACACGCCGAC
CAGGCACGGCGCCGAGGCGCGGTACGCGGACGCGGTCGAGTGGACCAGGCAGCACCTCGGTCGCAAGCGGTCCTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (200-276)

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-441)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	44.111	96.009	0.424