Detailed information NTG0985284

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: MKY94_RS12345
• Genome accession: NZ_CP152021
• Coordinates: 2431683..2434118 (-)
• Length: 811 a.a.
• NCBI ID: WP_342577118.1
• Uniprot ID: -
• Organism: Psychrobacillus sp. FSL K6-2843
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2426683..2439118

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKY94_RS12325 (MKY94_12325)	-	2427681..2427974 (-)	294	WP_144535791.1	DUF1292 domain-containing protein	-
MKY94_RS12330 (MKY94_12330)	ruvX	2427986..2428405 (-)	420	WP_144535789.1	Holliday junction resolvase RuvX	-
MKY94_RS12335 (MKY94_12335)	-	2428408..2428674 (-)	267	WP_053588802.1	IreB family regulatory phosphoprotein	-
MKY94_RS12340 (MKY94_12340)	alaS	2428751..2431384 (-)	2634	WP_342577117.1	alanine--tRNA ligase	-
MKY94_RS12345 (MKY94_12345)	recD2	2431683..2434118 (-)	2436	WP_342577118.1	ATP-dependent RecD-like DNA helicase	Machinery gene
MKY94_RS12350 (MKY94_12350)	-	2434142..2434798 (-)	657	WP_342577119.1	tetratricopeptide repeat protein	-
MKY94_RS12355 (MKY94_12355)	mnmA	2434813..2435928 (-)	1116	WP_342577120.1	tRNA 2-thiouridine(34) synthase MnmA	-
MKY94_RS12360 (MKY94_12360)	-	2435945..2437078 (-)	1134	WP_342577121.1	cysteine desulfurase family protein	-
MKY94_RS12365 (MKY94_12365)	-	2437096..2437518 (-)	423	WP_144535777.1	Rrf2 family transcriptional regulator	-

Sequence

Protein

• Length: 811 a.a.
• Molecular weight: 91126.58 Da
• Isoelectric Point: 5.5321

>NTDB_id=985284 MKY94_RS12345 WP_342577118.1 2431683..2434118(-) (recD2) [Psychrobacillus sp. FSL K6-2843]
MTKEMINNEKQFIAGRPIVSIFHNPQNLFSIIKLKVKSTNTVYKEKEIIVTGYFPPLVLEEAYKFTGYIKNHPKYGVQFQ
VETFQKEVPATETGIVHYLSSDMFPGIGRKTAEQIVKKLGENAINRILDDPSALDIIPRLAEEKKQTIRATLEQNLGLEK
VMIQLNEWGFGPQIAMKIYQVYREETISKLTDNPYRLIEDVEGVGFVRADELGYKLGIKGNHPDRIKAAIYHLLQSSSLS
EGHVFQYAEQLLEDVKRMLENAQREEISYDAITKCCIELAEESRIVGEVNRFYIPSLYFSEVGISSKVETLLTEKDLHHF
PLSEIKKHLGALEERLGVQYAKTQIKAIETALNSTITLLTGGPGTGKTTVVRGIVELYAELHGLSLDPKQWAKEQKPFPI
VLAAPTGRAAKRLSESTELPAMTIHRLLGFNGQEDNDTEGKEIEGRLVIIDETSMLDTWLGHQLLKAIPKDAQVIFVGDQ
DQLPPVGPGQVLKDLLACKRIPTVELVDIYRQSEGSSIIELAHEMKKGSVPATLTAKTKDRSFIKASPEQIPKVVEQVLK
AALSKGQSIREIQVLAPMYRGPAGIDTLNKMIQEMVNPNPDGTRKEMTFGETIYRIGDKVLQLVNQPESNVFNGDMGEVV
ALFKANETVEKKEMLVVSFDGNEVTYEKNDLNQITLAYCCSVHKSQGSEFQTVIMPVTRSYMKMLRRNLLYTGITRAKNF
LILCGDPEVFTFGVKRTDDLQRLTTLKERLADEETVEDAKSIAEEIEAKEVTSQSTHDDLVTTYLSSDNYHSIDPMIGMK
GINPYQFLDSD

Nucleotide

• Length: 2436 bp

>NTDB_id=985284 MKY94_RS12345 WP_342577118.1 2431683..2434118(-) (recD2) [Psychrobacillus sp. FSL K6-2843]
ATGACAAAAGAAATGATTAATAATGAAAAGCAATTTATTGCTGGTCGACCAATCGTCTCTATTTTTCATAATCCCCAAAA
CCTGTTCTCCATCATTAAATTAAAAGTAAAATCAACAAATACCGTATATAAAGAGAAAGAAATAATTGTAACTGGTTATT
TTCCTCCATTGGTTTTGGAAGAGGCATATAAATTTACTGGTTATATTAAAAATCATCCTAAGTATGGGGTTCAATTTCAG
GTAGAAACTTTTCAAAAAGAAGTTCCTGCTACTGAGACAGGTATAGTCCATTATCTTTCAAGTGATATGTTTCCTGGAAT
AGGGAGAAAGACTGCTGAGCAGATTGTGAAAAAGCTTGGAGAAAATGCGATCAATCGAATTTTAGATGACCCTTCTGCAT
TGGATATTATTCCAAGGTTGGCAGAGGAAAAGAAGCAGACAATCAGAGCTACCTTGGAGCAAAATCTAGGCTTGGAAAAA
GTAATGATTCAGCTAAATGAATGGGGCTTCGGTCCGCAAATAGCGATGAAAATCTATCAGGTCTATAGAGAAGAAACAAT
CTCTAAACTAACTGATAATCCATATCGTTTAATAGAGGATGTGGAGGGTGTTGGTTTTGTTCGTGCTGATGAGCTAGGCT
ATAAGCTTGGCATAAAAGGAAATCATCCGGACCGCATAAAAGCTGCTATCTACCATTTACTTCAATCATCTTCACTGAGT
GAGGGACATGTTTTTCAATATGCTGAGCAACTTCTTGAAGACGTTAAAAGAATGCTTGAAAATGCCCAAAGAGAAGAAAT
CTCTTATGATGCTATAACCAAATGCTGTATTGAACTCGCAGAGGAAAGCCGTATTGTTGGGGAAGTTAACCGATTTTATA
TTCCTTCTCTATATTTTTCAGAGGTGGGAATCAGTTCGAAAGTGGAAACCTTGTTAACAGAGAAGGACCTTCATCATTTT
CCGTTGTCGGAGATTAAAAAGCATTTAGGGGCATTAGAGGAGCGCTTAGGTGTTCAATATGCAAAAACACAAATTAAGGC
GATTGAAACAGCTCTGAACTCTACTATAACTCTCTTAACGGGAGGGCCTGGAACCGGGAAAACGACTGTTGTCAGAGGAA
TCGTAGAGCTCTATGCAGAGCTACATGGACTATCCTTAGATCCAAAACAATGGGCGAAAGAACAAAAGCCGTTTCCTATT
GTTTTGGCAGCTCCTACAGGGAGAGCTGCAAAGCGTTTAAGTGAATCGACCGAGCTACCAGCTATGACGATTCATAGACT
ACTCGGTTTTAATGGGCAAGAAGATAATGATACAGAAGGCAAAGAGATTGAAGGTAGATTAGTAATTATCGATGAGACTT
CCATGCTAGACACGTGGCTAGGGCATCAGCTCTTAAAGGCAATCCCCAAAGACGCTCAAGTCATATTTGTAGGTGACCAA
GATCAGTTGCCACCTGTTGGTCCGGGTCAGGTATTAAAGGATCTACTGGCTTGTAAAAGGATACCTACAGTGGAGCTTGT
CGATATTTATCGTCAATCTGAAGGGTCCTCAATTATTGAGCTAGCACACGAGATGAAAAAAGGAAGTGTGCCTGCAACTC
TAACTGCGAAAACTAAGGATCGCTCATTCATCAAGGCTTCTCCGGAACAAATTCCTAAAGTAGTAGAACAAGTCTTGAAA
GCAGCATTATCGAAGGGACAATCCATCCGAGAAATTCAGGTTCTAGCTCCTATGTATCGTGGACCGGCTGGGATTGACAC
GCTAAATAAGATGATTCAAGAAATGGTCAATCCAAATCCAGACGGTACAAGAAAAGAGATGACCTTCGGAGAAACTATTT
ATCGGATAGGAGATAAAGTACTTCAGCTGGTCAACCAACCAGAAAGTAATGTCTTTAATGGTGATATGGGTGAGGTAGTG
GCTCTTTTTAAAGCAAACGAAACAGTGGAAAAGAAAGAGATGCTAGTCGTATCATTTGATGGCAATGAAGTAACATATGA
AAAAAATGATTTGAATCAAATTACTCTTGCCTATTGTTGCTCTGTCCATAAGTCACAAGGCAGTGAATTCCAAACGGTTA
TTATGCCGGTTACTAGAAGCTATATGAAAATGCTTAGACGCAATTTGTTGTATACAGGTATAACAAGAGCAAAAAACTTT
TTAATTCTTTGTGGCGATCCGGAAGTTTTTACTTTTGGAGTGAAACGAACGGATGATTTACAGCGTTTAACAACGTTAAA
GGAACGTCTTGCGGACGAAGAAACAGTAGAAGATGCAAAATCAATAGCTGAAGAAATAGAAGCAAAAGAAGTTACAAGTC
AATCTACGCATGATGATTTAGTCACTACTTATTTATCCTCAGACAATTATCATTCGATTGACCCAATGATTGGCATGAAG
GGTATAAATCCCTATCAGTTCTTAGATTCGGATTGA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (677-724)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-245)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (588-659)

• AAA domain (AAA_30) (340-546)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	54.715	99.383	0.544