Detailed information NTG0984977

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: MKX52_RS11990
• Genome accession: NZ_CP152014
• Coordinates: 2341088..2343472 (-)
• Length: 794 a.a.
• NCBI ID: WP_012010723.1
• Uniprot ID: A8FFN8
• Organism: Bacillus sp. FSL R5-0422
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2336088..2348472

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKX52_RS11955 (MKX52_11955)	-	2336965..2337693 (+)	729	WP_144468802.1	amino acid ABC transporter ATP-binding protein	-
MKX52_RS11960 (MKX52_11960)	-	2337743..2338516 (+)	774	WP_342491891.1	transporter substrate-binding domain-containing protein	-
MKX52_RS11965 (MKX52_11965)	-	2338584..2339237 (+)	654	WP_342490763.1	amino acid ABC transporter permease	-
MKX52_RS11970 (MKX52_11970)	-	2339253..2339903 (+)	651	WP_119125179.1	amino acid ABC transporter permease	-
MKX52_RS11975 (MKX52_11975)	-	2340137..2340268 (-)	132	WP_003216198.1	YrzQ family protein	-
MKX52_RS11980 (MKX52_11980)	-	2340289..2340480 (-)	192	WP_003216308.1	hypothetical protein	-
MKX52_RS11985 (MKX52_11985)	-	2340494..2340952 (-)	459	WP_342490764.1	prc-barrel domain-containing protein	-
MKX52_RS11990 (MKX52_11990)	recD2	2341088..2343472 (-)	2385	WP_012010723.1	ATP-dependent RecD-like DNA helicase	Machinery gene
MKX52_RS11995 (MKX52_11995)	-	2343492..2344145 (-)	654	WP_012010724.1	tetratricopeptide repeat protein	-
MKX52_RS12000 (MKX52_12000)	mnmA	2344206..2345324 (-)	1119	WP_003216305.1	tRNA 2-thiouridine(34) synthase MnmA	-
MKX52_RS12005 (MKX52_12005)	-	2345420..2346562 (-)	1143	WP_342490765.1	cysteine desulfurase family protein	-
MKX52_RS12010 (MKX52_12010)	-	2346581..2347000 (-)	420	WP_012010726.1	Rrf2 family transcriptional regulator	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 88966.47 Da
• Isoelectric Point: 5.1611

>NTDB_id=984977 MKX52_RS11990 WP_012010723.1 2341088..2343472(-) (recD2) [Bacillus sp. FSL R5-0422]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGKLGSETLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGSDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNEYKVTEMDVADQIIALGEGKEMIIEDERCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDDEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASQAVPAVTLTDIYRQADGSSIVELAHDMKNGVLPKDITARSKDRSFIKCSADQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEEIMDAELAALQKELPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=984977 MKX52_RS11990 WP_012010723.1 2341088..2343472(-) (recD2) [Bacillus sp. FSL R5-0422]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAGGGGACAGTTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTGAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAGGAAACTTACACCTTCTATGGCAAAGTCACGAGCCATCCGAAGTTTGGTGAA
CAGTTTCAGGCGACTCATTTTCAAAAGGAAGTACCGACAACAAAACAAGGAATAATCCATTATCTTTCAAGTGATTTATT
TGAGGGGATAGGCAAAAAGACAGCGGAAGAAATTGTAGGAAAGCTTGGCAGTGAGACGCTTCATAAAATTATGCGTGACC
CAGCGGTTTTGTATGACGTTCCGCGCTTATCAAAAAAGAAGGCTGATAAGCTGGCCGCAGCGCTCCAGGAGCATCAAGGA
TTGGAACAAATCATGATCAGCTTGAATCAATACGGCTTTGGTCCGCAGCTCAGCATGAAGATTTATCAAGTGTACGAAAG
TGAGACGCTGCAGAAGATTGAAGAAAACCCGTATCAGCTCGTCAAGGATGTTGAAGGGATCGGATTTATTAAGGCAGATG
AACTTGGCGCTAGAACCGGCATCTCAGGAAGTGACCCAGAGCGAATCCGTGCAGCCTTGCTTTATACAGTGGAGACAGCC
AGTCTTCAGGACGGTCATACGTACATACAAACAAAGGATTTGATCGTCGAAACCCGAAAACTGCTCAATCAAACAGGCAA
TGAGTACAAAGTGACGGAAATGGACGTCGCCGATCAGATCATTGCACTTGGCGAAGGGAAAGAGATGATCATTGAAGATG
AGCGGTGCTATCATCCGTCCTTATTTTATGCCGAGCAAAGTGTCGCGAAACGTATACAAAAAATCGTCTCCCAAACGGAA
TATGCAGATCAATTTCCTGAATCAGAATTCCTTCTAGCCCTTGGTGAGCTAGAGGAACGGCTGGGCGTCCAATATGCGCC
GACACAAAAGGAAGCGATTCAAAAGGCACTCATGTCCCCAATGCTGCTTTTAACAGGCGGACCTGGGACTGGGAAGACAA
CAGTCATTAAAGGGATTGTTGAGCTTTACAGCGATCTTCATGGTGTATCACTGGACCCAAGTGATTATAAAAAAGATGAA
TCCTTCCCATTTGTGCTTGCGGCACCAACTGGGCGAGCAGCTAAACGGATGACAGAATCAACAGGGCTTCCAGCTGTGAC
GATTCATCGGCTGCTTGGTTGGAACGGATCAGAGGGATTTTCTCATGATGATGAACAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCAAGTATGCTAGATATTTGGCTTGCGAATCATTTGTTTAAAGCCATTCCTGACCATATACAAGTGATC
ATGGTGGGGGATGAACATCAACTTCCGTCTGTCGGACCAGGCCAAGTGTTAAGAGACTTGCTTGCATCACAAGCCGTGCC
AGCGGTTACCCTAACCGATATTTACCGGCAGGCAGACGGCTCCAGCATTGTTGAACTTGCACATGATATGAAAAATGGTG
TCCTGCCAAAGGATATTACCGCACGTTCAAAGGATCGATCTTTCATCAAATGCTCAGCAGATCAAATGAAAGAAGTGATT
GAGAAAGTCGTCAGCAATGCTGCTCAAAAAGGCTATTCAGCTAAAGATATTCAAGTGCTTGCGCCCATGTACAAAGGAAA
AGCAGGCATTAATGAGCTCAATAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAAGGTCGAGAAATTCCTTTTG
GTGATGTGGTGTACCGGACTGGTGATAAAGTGCTTCAGCTTGTGAATCAGCCAGAGAACAATATTTTTAACGGTGATATT
GGCGAAATTGTCTCCATTTTTTATGCGAAAGAAAACACAGAAAAAGAAGATATGGCTGTGATCTCCTTTGATGGGAATGA
AATCACTTTTACTAAAAAGGATTTTCATCAATTTACACATGCCTATTGTTGCTCTATCCACAAATCACAAGGCAGTGAAT
TCCCTATCGTTGTACTACCAGTCGTGAGAAGTTATTACAGAATGCTTCGGCGAAATTTGCTGTACACAGCCATTACACGA
AGTAAAAAGTTTTTAATCCTGTGCGGCGAGGAATCAGCACTGGAGTGGGGCGTGAAAAACAATGAGGATTCCCTCAGACA
AACGTCCTTAACGATGCGGCTCGTGCAAACCGAAGAGATTATGGATGCGGAGCTTGCAGCACTTCAAAAAGAACTGCCGT
TTAGCGTGCATGATGCAAATATCGGTATGGAGGGAATCACTCCATTTGATTTTATGCATGAATAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• AAA domain (AAA_30) (345-553)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

3D structure

• AlphaFold DB: A8FFN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	80.025	100	0.802