Detailed information    

insolico Bioinformatically predicted

Overview


Name   recD2   Type   Machinery gene
Locus tag   MKZ22_RS13585 Genome accession   NZ_CP152009
Coordinates   2602928..2605312 (-) Length   794 a.a.
NCBI ID   WP_065098513.1    Uniprot ID   -
Organism   Bacillus sp. FSL R7-0675     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2597928..2610312
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKZ22_RS13550 (MKZ22_13550) - 2598984..2599712 (+) 729 WP_044139592.1 amino acid ABC transporter ATP-binding protein -
  MKZ22_RS13555 (MKZ22_13555) - 2599726..2600535 (+) 810 WP_065098510.1 transporter substrate-binding domain-containing protein -
  MKZ22_RS13560 (MKZ22_13560) - 2600616..2601269 (+) 654 WP_003216507.1 amino acid ABC transporter permease -
  MKZ22_RS13565 (MKZ22_13565) - 2601285..2601935 (+) 651 WP_065098512.1 amino acid ABC transporter permease -
  MKZ22_RS13570 (MKZ22_13570) - 2601978..2602109 (-) 132 WP_003216198.1 YrzQ family protein -
  MKZ22_RS13575 (MKZ22_13575) - 2602130..2602321 (-) 192 WP_003216308.1 hypothetical protein -
  MKZ22_RS13580 (MKZ22_13580) - 2602335..2602793 (-) 459 WP_065098677.1 prc-barrel domain-containing protein -
  MKZ22_RS13585 (MKZ22_13585) recD2 2602928..2605312 (-) 2385 WP_065098513.1 ATP-dependent RecD-like DNA helicase Machinery gene
  MKZ22_RS13590 (MKZ22_13590) - 2605332..2605985 (-) 654 WP_044139597.1 tetratricopeptide repeat protein -
  MKZ22_RS13595 (MKZ22_13595) mnmA 2606046..2607164 (-) 1119 WP_106066922.1 tRNA 2-thiouridine(34) synthase MnmA -
  MKZ22_RS13600 (MKZ22_13600) - 2607260..2608402 (-) 1143 WP_106066921.1 cysteine desulfurase family protein -
  MKZ22_RS13605 (MKZ22_13605) - 2608421..2608840 (-) 420 WP_044139599.1 Rrf2 family transcriptional regulator -

Sequence


Protein


Download         Length: 794 a.a.        Molecular weight: 89033.57 Da        Isoelectric Point: 5.2097

>NTDB_id=984631 MKZ22_RS13585 WP_065098513.1 2602928..2605312(-) (recD2) [Bacillus sp. FSL R7-0675]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGQLGTQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNEYKVTEMDVANQIIALGEGKEMIIEDERCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASQAVPAVTLTDIYRQADGSSIVELAHDMKNGVLPKDITARSKDRSFIKCSVDQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEEVMDAELAALQKELPFSVHDANIGMEGITPFDFMHE

Nucleotide


Download         Length: 2385 bp        

>NTDB_id=984631 MKZ22_RS13585 WP_065098513.1 2602928..2605312(-) (recD2) [Bacillus sp. FSL R7-0675]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAAGGGACAGTTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTGAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAAGAAACTTACACCTTCTATGGCAAAGTCACAAGCCATCCGAAATTTGGTGAA
CAGTTTCAGGCCACTCATTTTCAAAAGGAAGTACCGACAACAAAGCAAGGAATCATTCATTATCTCTCAAGTGATTTATT
CGAAGGGATAGGGAAAAAGACGGCGGAAGAAATTGTAGGGCAGCTTGGCACCCAGACGCTTCATAAAATTATGCGTGACC
CAGCGGTTTTGTATGACGTTCCGCGCTTATCAAAAAAGAAGGCAGATAAGCTGGCCGCAGCGCTCCAGGAGCATCAAGGA
TTGGAACAAATCATGATCAGCCTGAATCAATACGGCTTTGGTCCGCAGCTCAGCATGAAGATTTATCAAGTGTACGAGAG
TGAGACGCTGCAGAAGATTGAAGAAAACCCGTATCAGCTCGTCAAGGATGTCGAAGGGATCGGATTTATTAAGGCGGATG
AACTTGGCGCTAGAACCGGCATCTCAGGAAATGACCCAGAGCGAATCCGTGCAGCCTTGCTTTATACAGTGGAGACAGCC
AGCCTTCAGGACGGTCATACGTACATACAAACAAAGGATTTGATCGTCGAAACCCGAAAACTGCTCAATCAGACAGGCAA
TGAGTACAAAGTGACGGAAATGGACGTCGCCAATCAGATCATTGCACTTGGCGAAGGGAAAGAGATGATCATTGAAGATG
AGCGCTGCTATCATCCGTCCTTATTTTATGCCGAGCAAAGTGTCGCCAAACGTATACAAAAAATCGTCTCCCAAACGGAA
TATGCAGATCAATTCCCTGAATCAGAATTTCTGCTAGCTCTTGGTGAGCTCGAGGAACGGCTGGGCGTCCAGTATGCACC
GACACAAAAGGAAGCGATTCAAAAGGCGCTCATGTCCCCAATGCTGCTTTTAACAGGCGGACCTGGGACTGGGAAGACAA
CAGTCATTAAAGGGATTGTTGAGCTTTACAGCGATCTTCACGGGGTATCTCTTGATCCGAGTGATTACAAAAAAGATGAA
TCCTTTCCATTTGTGCTTGCGGCGCCAACTGGACGAGCAGCTAAACGGATGACAGAATCAACAGGGCTTCCAGCTGTGAC
GATTCACCGGCTGCTTGGTTGGAACGGGTCAGAGGGATTCTCGCATGATGAAGAACAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCAAGTATGCTAGATATTTGGCTTGCGAATCATTTGTTTAAAGCCATTCCTGATCATATCCAAGTGATC
ATGGTGGGGGATGAACATCAGCTTCCGTCAGTCGGACCAGGCCAAGTGTTAAGAGACTTGCTTGCATCACAAGCTGTGCC
AGCTGTTACCCTGACAGATATTTACCGTCAGGCAGACGGCTCCAGCATTGTTGAACTTGCACATGATATGAAAAATGGCG
TCCTGCCAAAGGATATTACCGCACGTTCAAAGGATCGATCTTTCATAAAATGCTCAGTTGATCAAATGAAAGAAGTGATT
GAGAAGGTCGTCAGCAATGCTGCTCAAAAAGGCTATTCAGCTAAAGACATTCAAGTGCTTGCGCCCATGTATAAAGGAAA
AGCAGGCATTAATGAGCTCAATAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAGGGCAGAGAAATCCCATTTG
GTGATGTCGTGTACCGGACCGGTGATAAAGTGCTTCAGCTAGTGAATCAGCCAGAGAACAATATTTTTAACGGTGATATT
GGCGAGATTGTCTCGATTTTCTATGCGAAAGAAAACACGGAAAAAGAAGACATGGCTGTGATCTCCTTTGATGGGAATGA
AATCACCTTTACAAAAAAGGATTTTCATCAATTTACACATGCCTATTGCTGTTCGATCCACAAATCACAAGGCAGTGAAT
TCCCCATCGTTGTGCTTCCAGTCGTGAGAAGCTACTATAGAATGCTTCGGCGAAATCTGCTGTACACAGCCATTACACGA
AGTAAAAAGTTTTTAATTCTGTGCGGCGAGGAATCAGCACTGGAGTGGGGCGTGAAAAACAATGAGGATTCGCTCAGACA
AACGTCCTTAACGATGCGGCTCGTGCAAACCGAAGAGGTTATGGATGCGGAGCTTGCAGCACTTCAAAAAGAACTGCCGT
TTAGCGTGCATGATGCAAATATCGGTATGGAGGGAATCACTCCATTTGATTTTATGCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recD2 Bacillus subtilis subsp. subtilis str. 168

80.276

100

0.805


Multiple sequence alignment