Detailed information NTG0983858

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACN9LU_RS05350
• Genome accession: NZ_CP184019
• Coordinates: 1089498..1090523 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain 1434
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1084498..1095523

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN9LU_RS05320 (ACN9LU_05320)	zapB	1084582..1084827 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ACN9LU_RS05325 (ACN9LU_05325)	rraA	1084912..1085397 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACN9LU_RS05330 (ACN9LU_05330)	menA	1085490..1086416 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACN9LU_RS05335 (ACN9LU_05335)	hslU	1086483..1087814 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ACN9LU_RS05340 (ACN9LU_05340)	hslV	1087824..1088354 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACN9LU_RS05345 (ACN9LU_05345)	ftsN	1088447..1089406 (-)	960	WP_000068834.1	cell division protein FtsN	-
ACN9LU_RS05350 (ACN9LU_05350)	cytR	1089498..1090523 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
ACN9LU_RS05355 (ACN9LU_05355)	priA	1090679..1092877 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
ACN9LU_RS05360 (ACN9LU_05360)	rpmE	1093080..1093292 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ACN9LU_RS05365 (ACN9LU_05365)	yiiX	1093353..1093961 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
ACN9LU_RS05370 (ACN9LU_05370)	metJ	1094021..1094338 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=983858 ACN9LU_RS05350 WP_000644908.1 1089498..1090523(-) (cytR) [Escherichia coli strain 1434]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=983858 ACN9LU_RS05350 WP_000644908.1 1089498..1090523(-) (cytR) [Escherichia coli strain 1434]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625