Detailed information NTG0983379

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: NST65_RS12125
• Genome accession: NZ_CP151983
• Coordinates: 2365473..2367857 (-)
• Length: 794 a.a.
• NCBI ID: WP_041118108.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL P4-0248
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2360473..2372857

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NST65_RS12090 (NST65_12090)	-	2361496..2362224 (+)	729	WP_034622422.1	amino acid ABC transporter ATP-binding protein	-
NST65_RS12095 (NST65_12095)	-	2362238..2363047 (+)	810	WP_025092422.1	transporter substrate-binding domain-containing protein	-
NST65_RS12100 (NST65_12100)	-	2363125..2363778 (+)	654	WP_024427868.1	amino acid ABC transporter permease	-
NST65_RS12105 (NST65_12105)	-	2363794..2364444 (+)	651	WP_024427867.1	amino acid ABC transporter permease	-
NST65_RS12110 (NST65_12110)	-	2364524..2364655 (-)	132	WP_003216198.1	YrzQ family protein	-
NST65_RS12115 (NST65_12115)	-	2364676..2364867 (-)	192	WP_003216308.1	hypothetical protein	-
NST65_RS12120 (NST65_12120)	-	2364881..2365399 (-)	519	WP_052470355.1	PRC-barrel domain-containing protein	-
NST65_RS12125 (NST65_12125)	recD2	2365473..2367857 (-)	2385	WP_041118108.1	ATP-dependent RecD-like DNA helicase	Machinery gene
NST65_RS12130 (NST65_12130)	-	2367877..2368530 (-)	654	WP_034279920.1	tetratricopeptide repeat protein	-
NST65_RS12135 (NST65_12135)	mnmA	2368590..2369708 (-)	1119	WP_111926403.1	tRNA 2-thiouridine(34) synthase MnmA	-
NST65_RS12140 (NST65_12140)	-	2369803..2370945 (-)	1143	WP_111926401.1	cysteine desulfurase family protein	-
NST65_RS12145 (NST65_12145)	-	2370964..2371383 (-)	420	WP_024423125.1	Rrf2 family transcriptional regulator	-
NST65_RS12150 (NST65_12150)	-	2371592..2372857 (+)	1266	WP_025092426.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89101.69 Da
• Isoelectric Point: 5.3289

>NTDB_id=983379 NST65_RS12125 WP_041118108.1 2365473..2367857(-) (recD2) [Bacillus sp. FSL P4-0248]
MQEHPDQMKLEDEPFLKGTIQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGKLGNQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKEMIIEDDRCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASKAVPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIRCSADQMKEVI
EKVVSNAAQKGFSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEQIMDAELEALQKELPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=983379 NST65_RS12125 WP_041118108.1 2365473..2367857(-) (recD2) [Bacillus sp. FSL P4-0248]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAGGGGACCATTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTAAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAGGAAACCTACACCTTTTATGGCAAAGTGACAAGCCATCCGAAATTTGGTGAA
CAGTTTCAGGCCACTCATTTTCAAAAGGAAGTACCAACAACGAAGCAAGGAATCATACATTATCTCTCAAGTGATTTATT
TGAAGGGATAGGGAAAAAGACGGCTGAAGAAATCGTCGGGAAGCTTGGCAATCAGACGCTCCATAAGATTATGCGTGACC
CAGCTGTTTTGTATGATGTACCGCGCTTATCAAAAAAGAAGGCGGATAAGCTGGCCGCAGCGCTTCAGGAGCATCAAGGG
CTGGAACAAATCATGATCAGCCTGAATCAATATGGCTTTGGTCCGCAGCTCAGCATGAAGATTTACCAAGTGTATGAGAG
TGAAACGCTGCAGAAAATCGAGGAAAATCCCTATCAGCTTGTCAAGGATGTCGAGGGAATCGGATTTATTAAGGCGGATG
AGCTTGGTGCTAGAACAGGCATCTCAGGTAATGACCCAGAGCGGATTCGCGCCGCCTTGCTATATACAGTGGAGACAGCC
AGTCTACAGGACGGTCATACGTACATACAAACGAAAGATTTGATCGTCGAAACCCGCAAGCTGCTCAACCAAACAGGCAA
TGATTACAAAGTGACTGAAATGGATGTTGCCAATCAGATCATTGCACTTGGCGAAGGAAAAGAAATGATCATTGAAGACG
ACCGCTGCTATCATCCATCCTTATTTTATGCAGAGCAAAGTGTCGCCAAACGCATTCAAAAAATCGTCTCCCAAACAGAA
TATGCAGATCAATTTCCTGAATCAGAATTCCTGCTAGCACTTGGCGAGCTGGAGGAGCGGTTAGGCGTCCAGTATGCACC
GACACAAAAGGAAGCGATTCAAAAGGCACTCATGTCCCCGATGCTGCTTTTAACAGGCGGGCCTGGAACAGGGAAGACGA
CGGTCATTAAAGGAATTGTCGAGCTTTACAGTGATCTTCACGGTGTTTCTCTTGATCCGAGTGATTATAAAAAAGATGAA
TCCTTCCCCTTTGTGCTTGCGGCACCAACTGGACGGGCGGCTAAGCGGATGACAGAATCAACAGGGCTTCCAGCTGTCAC
CATTCACCGGCTGCTAGGCTGGAACGGTTCGGAGGGCTTCTCGCATGATGAGGAACAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCAAGTATGCTGGATATTTGGCTGGCGAATCATTTGTTTAAAGCGATTCCTGATCATATCCAAGTGATT
ATGGTAGGAGATGAACATCAGCTGCCATCTGTCGGACCAGGCCAAGTTTTACGGGATTTGCTTGCCTCAAAAGCCGTGCC
GGCTGTTACCCTGACAGATATTTACCGGCAGGCAGACGGCTCAACCATTGTTGAACTGGCACATGATATGAAAAATGGTG
TGCTGCCAAAGGATATTACTGCACGCTCAAAGGATCGGTCCTTCATTCGGTGTTCAGCTGATCAAATGAAAGAAGTCATT
GAGAAAGTTGTCAGCAATGCTGCTCAAAAAGGATTTTCGGCAAAGGACATTCAAGTGCTCGCACCAATGTATAAAGGAAA
AGCAGGCATCAATGAGCTCAACAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAAGGCAGAGAAATCCCGTTTG
GTGATGTGGTGTACCGGACAGGTGATAAGGTGCTTCAGCTTGTGAATCAGCCGGAGAACAACATTTTTAACGGCGATATC
GGCGAAATTGTCTCGATTTTTTATGCAAAAGAAAATACAGAAAAAGAAGACATGGCCGTGATCTCCTTTGATGGGAATGA
AATCACCTTTACAAAAAAGGATTTTCATCAATTTACACATGCTTATTGCTGCTCCATTCACAAATCACAAGGAAGTGAAT
TCCCGATTGTTGTGCTGCCAGTCGTCAGGAGCTATTACCGAATGCTTCGGCGGAATCTGCTGTACACAGCCATTACACGC
AGTAAAAAGTTTTTAATACTGTGCGGCGAGGAATCAGCGCTGGAATGGGGTGTGAAAAACAATGAGGATTCCCTTAGACA
AACGTCCTTAACGATGCGGCTAGTGCAAACCGAACAAATCATGGATGCAGAACTTGAAGCGCTCCAAAAAGAGCTTCCGT
TTAGCGTACATGACGCAAATATTGGCATGGAGGGAATCACTCCATTTGATTTTATGCATGAGTAG

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	79.899	100	0.801