Detailed information NTG0983337

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ACN2WE_RS07545
• Genome accession: NZ_CP183921
• Coordinates: 1546100..1547461 (-)
• Length: 453 a.a.
• NCBI ID: WP_420032623.1
• Uniprot ID: -
• Organism: Streptomyces sp. cg28
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1541100..1552461

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN2WE_RS07530 (ACN2WE_07530)	-	1541667..1543877 (+)	2211	WP_420032621.1	ATP-binding protein	-
ACN2WE_RS07535 (ACN2WE_07535)	rpsD	1543908..1544522 (-)	615	WP_018534860.1	30S ribosomal protein S4	-
ACN2WE_RS07540 (ACN2WE_07540)	-	1544864..1545547 (-)	684	WP_420032622.1	HNH endonuclease family protein	-
ACN2WE_RS07545 (ACN2WE_07545)	rarA	1546100..1547461 (-)	1362	WP_420032623.1	replication-associated recombination protein A	Machinery gene
ACN2WE_RS07550 (ACN2WE_07550)	-	1547507..1548154 (-)	648	WP_420032624.1	vitamin K epoxide reductase family protein	-
ACN2WE_RS07555 (ACN2WE_07555)	-	1548295..1549167 (+)	873	WP_420032625.1	ABC transporter ATP-binding protein	-
ACN2WE_RS07560 (ACN2WE_07560)	-	1549164..1550033 (+)	870	WP_420032626.1	ABC transporter permease	-
ACN2WE_RS07565 (ACN2WE_07565)	-	1550009..1551226 (+)	1218	WP_420037821.1	sensor histidine kinase	-
ACN2WE_RS07570 (ACN2WE_07570)	-	1551223..1551846 (+)	624	WP_420032627.1	response regulator	-

Sequence

Protein

• Length: 453 a.a.
• Molecular weight: 48011.55 Da
• Isoelectric Point: 6.1502

>NTDB_id=983337 ACN2WE_RS07545 WP_420032623.1 1546100..1547461(-) (rarA) [Streptomyces sp. cg28]
MEPDLFTAAAEERQEKDPSASPLAVRMRPRTLDEVVGQQHLLKPGSPLRRLVGEGGGGPAGASSVILWGPPGIGKTTLAY
VVSKATNKRFVELSAITAGVKEVRAVIEGARRAMGGHGKETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SIISPLLSRSLLLTLEPLTDDDLRGLLARALTDERGLGGAVTLAEDAEEHLLRVAGGDARRALTALEAAAGAALAKSEEA
ITLESVEETVNRAAVKYDRDGDQHYDVASALIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMISASEDIGLADPTAL
PIAVAAAQAVAMIGFPEAALTLSHATIALALAPKSNAATTAIGAAMEDVRKGLAGPVPAHLRDGHYKGAAKLGHAQGYVY
PHDVPGGIAAQQYAPDAIAGRRYYEPTRYGAEARYADVVERVRERLRGESGPV

Nucleotide

• Length: 1362 bp

>NTDB_id=983337 ACN2WE_RS07545 WP_420032623.1 1546100..1547461(-) (rarA) [Streptomyces sp. cg28]
GTGGAACCCGACCTCTTCACCGCCGCAGCCGAAGAACGCCAGGAGAAGGACCCCTCCGCGAGCCCCCTGGCCGTCCGGAT
GCGCCCGCGCACCCTCGACGAAGTCGTCGGACAGCAGCATCTGCTCAAGCCGGGGTCGCCGCTGCGCCGCCTGGTCGGCG
AGGGCGGCGGCGGGCCGGCGGGCGCGTCGTCGGTGATCCTGTGGGGCCCGCCCGGCATCGGCAAGACGACGCTCGCGTAC
GTCGTCTCCAAGGCGACGAACAAGCGGTTCGTGGAGCTGTCCGCGATCACCGCGGGCGTCAAGGAGGTCCGGGCCGTCAT
CGAGGGCGCCCGGCGGGCGATGGGCGGACACGGCAAGGAGACCGTCCTCTTCCTCGACGAGATCCACCGCTTCAGCAAGG
CCCAGCAGGACTCGCTGCTGCCCGCGGTGGAGAACCGCTGGGTGACGCTGATCGCGGCGACCACGGAGAACCCGTACTTC
TCGATCATCTCGCCGCTGCTCTCCCGCTCCCTGCTCCTCACCCTGGAGCCGCTGACCGACGACGACCTGCGCGGGCTTCT
CGCGCGGGCGCTCACCGACGAGCGGGGGCTCGGCGGGGCCGTGACCCTCGCCGAGGACGCCGAGGAGCACCTGCTGCGCG
TCGCGGGCGGGGACGCCCGGCGGGCGCTCACCGCGCTGGAGGCCGCCGCCGGGGCCGCCCTCGCCAAGAGCGAGGAGGCC
ATCACCCTCGAGAGCGTCGAGGAGACCGTCAATCGCGCGGCCGTGAAGTACGACCGTGACGGCGACCAGCACTACGACGT
CGCCAGCGCCCTCATCAAGTCCATCCGCGGCTCCGACGTGGACGCCGCGCTGCACTATCTGGCCCGCATGATCGAGGCCG
GTGAGGACCCCCGCTTCATCGCCCGGCGGCTGATGATCTCCGCCAGCGAGGACATCGGGCTCGCCGATCCGACGGCCCTG
CCCATCGCGGTCGCCGCCGCGCAGGCCGTTGCCATGATCGGGTTCCCGGAGGCCGCGCTGACCTTGAGCCACGCGACGAT
CGCGCTCGCGCTGGCCCCCAAGTCGAACGCGGCGACGACCGCGATCGGCGCCGCCATGGAGGACGTCCGCAAGGGCCTCG
CCGGGCCGGTCCCGGCCCACCTGCGGGACGGCCACTACAAGGGCGCCGCCAAGCTGGGGCATGCCCAGGGGTACGTCTAT
CCCCACGATGTCCCCGGGGGCATCGCGGCCCAGCAGTACGCGCCGGACGCCATCGCGGGCCGCCGCTACTACGAGCCGAC
GCGCTATGGGGCCGAGGCGCGCTATGCCGACGTGGTCGAGCGGGTCCGAGAACGCTTGCGCGGCGAGTCCGGCCCCGTCT
GA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-442)

• AAA C-terminal domain (AAA_assoc_2) (199-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	45.455	94.702	0.43