Detailed information NTG0983318

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: NSQ25_RS12300
• Genome accession: NZ_CP151982
• Coordinates: 2382293..2384677 (-)
• Length: 794 a.a.
• NCBI ID: WP_265192032.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL R5-0512
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2377293..2389677

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSQ25_RS12265 (NSQ25_12265)	-	2378291..2379019 (+)	729	WP_041086396.1	amino acid ABC transporter ATP-binding protein	-
NSQ25_RS12270 (NSQ25_12270)	-	2379033..2379842 (+)	810	WP_034279926.1	transporter substrate-binding domain-containing protein	-
NSQ25_RS12275 (NSQ25_12275)	-	2379920..2380573 (+)	654	WP_024427868.1	amino acid ABC transporter permease	-
NSQ25_RS12280 (NSQ25_12280)	-	2380589..2381239 (+)	651	WP_024427867.1	amino acid ABC transporter permease	-
NSQ25_RS12285 (NSQ25_12285)	-	2381344..2381475 (-)	132	WP_003216198.1	YrzQ family protein	-
NSQ25_RS12290 (NSQ25_12290)	-	2381496..2381687 (-)	192	WP_003216308.1	hypothetical protein	-
NSQ25_RS12295 (NSQ25_12295)	-	2381701..2382219 (-)	519	WP_081279470.1	PRC-barrel domain-containing protein	-
NSQ25_RS12300 (NSQ25_12300)	recD2	2382293..2384677 (-)	2385	WP_265192032.1	ATP-dependent RecD-like DNA helicase	Machinery gene
NSQ25_RS12305 (NSQ25_12305)	-	2384697..2385350 (-)	654	WP_034279920.1	tetratricopeptide repeat protein	-
NSQ25_RS12310 (NSQ25_12310)	mnmA	2385410..2386528 (-)	1119	WP_024423123.1	tRNA 2-thiouridine(34) synthase MnmA	-
NSQ25_RS12315 (NSQ25_12315)	-	2386623..2387765 (-)	1143	WP_326136208.1	cysteine desulfurase family protein	-
NSQ25_RS12320 (NSQ25_12320)	-	2387784..2388203 (-)	420	WP_024423125.1	Rrf2 family transcriptional regulator	-
NSQ25_RS12325 (NSQ25_12325)	-	2388412..2389677 (+)	1266	WP_034279916.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89107.65 Da
• Isoelectric Point: 5.2653

>NTDB_id=983318 NSQ25_RS12300 WP_265192032.1 2382293..2384677(-) (recD2) [Bacillus sp. FSL R5-0512]
MQEHPDQMKLEDEPFLKGTIQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGKLGNQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKEMIIEDDRCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASKAVPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSADQMKEVI
EKVVSNAAQKGFSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEQFMDAELEALQKELPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=983318 NSQ25_RS12300 WP_265192032.1 2382293..2384677(-) (recD2) [Bacillus sp. FSL R5-0512]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAGGGGACCATTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTAAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAGGAAACCTACACCTTTTATGGCAAAGTGACAAGCCATCCGAAATTTGGTGAA
CAGTTTCAGGCCACTCATTTTCAAAAGGAAGTACCAACAACGAAGCAAGGAATCATACATTATCTCTCAAGTGATTTATT
TGAGGGGATAGGGAAAAAGACGGCTGAAGAAATCGTCGGGAAGCTTGGCAATCAGACGCTCCATAAGATTATGCGTGACC
CAGCTGTTTTGTATGATGTACCGCGCTTATCAAAAAAGAAGGCGGATAAGCTGGCCGCAGCGCTTCAGGAGCATCAAGGG
CTGGAACAAATCATGATCAGCCTGAATCAATATGGCTTTGGTCCGCAGCTCAGCATGAAGATTTACCAAGTGTATGAGAG
TGAAACGCTGCAGAAAATCGAGGAAAATCCCTATCAGCTTGTCAAGGATGTCGAGGGAATCGGATTTATTAAGGCGGATG
AGCTTGGTGCTAGAACAGGCATCTCAGGTAATGACCCAGAGCGGATTCGCGCCGCCTTGCTATATACAGTGGAGACAGCC
AGTCTACAGGACGGTCATACGTACATACAAACGAAAGATTTGATCGTCGAAACCCGCAAACTGCTCAACCAAACAGGCAA
TGATTACAAAGTGACTGAAATGGATGTTGCCAATCAGATCATTGCACTTGGCGAAGGAAAAGAAATGATCATTGAAGACG
ACCGCTGCTATCATCCATCCTTATTTTATGCAGAACAAAGTGTCGCCAAACGCATTCAGAAAATCGTCTCCCAAACAGAA
TATGCAGATCAATTTCCTGAATCAGAATTCCTGCTAGCACTTGGTGAGCTGGAGGAGCGGTTAGGCGTCCAATATGCACC
GACACAAAAGGAAGCGATTCAAAAGGCACTCATGTCCCCGATGCTGCTTTTAACAGGCGGGCCTGGAACAGGGAAGACGA
CGGTCATTAAAGGAATTGTCGAGCTTTACAGTGATCTTCACGGTGTTTCTCTTGATCCGAGTGATTATAAAAAAGATGAA
TCCTTCCCATTTGTGCTTGCGGCACCAACTGGACGGGCGGCTAAACGGATGACAGAATCAACAGGGCTTCCAGCTGTCAC
CATTCACCGGCTGCTAGGCTGGAATGGTTCGGAGGGCTTCTCTCATGATGAGGAACAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCAAGTATGCTGGATATTTGGCTGGCGAATCATTTGTTTAAAGCCATTCCTGATCATATCCAAGTGATT
ATGGTAGGGGATGAACATCAGCTGCCATCTGTCGGACCAGGCCAAGTTTTACGGGATTTGCTTGCCTCAAAAGCCGTGCC
GGCTGTTACCCTGACAGATATTTACCGGCAGGCAGACGGCTCCACCATTGTTGAACTTGCACATGATATGAAAAATGGTG
TGCTGCCAAAGGATATCACTGCACGCTCAAAGGATCGGTCCTTCATTCAGTGTTCAGCTGATCAAATGAAAGAAGTCATT
GAGAAAGTTGTCAGCAATGCTGCTCAAAAAGGGTTTTCGGCAAAGGATATTCAAGTGCTGGCACCGATGTATAAAGGAAA
AGCAGGCATCAATGAGCTCAACAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAGGGCAGAGAAATCCCGTTTG
GTGATGTGGTGTACCGGACAGGTGATAAGGTGCTTCAGCTTGTGAATCAGCCGGAGAACAACATTTTTAACGGCGATATC
GGTGAAATTGTCTCGATTTTTTATGCAAAAGAAAATACAGAAAAAGAAGACATGGCTGTGATCTCCTTTGATGGAAATGA
AATCACCTTTACAAAAAAAGATTTTCATCAATTTACACATGCTTATTGCTGCTCTATTCACAAATCACAAGGAAGTGAAT
TCCCGATTGTTGTGCTGCCAGTCGTGAGGAGCTATTACCGAATGCTTCGGCGGAATCTACTGTACACAGCCATTACACGC
AGTAAAAAGTTTTTAATACTGTGCGGCGAGGAATCAGCGCTGGAGTGGGGCGTGAAAAACAATGAGGATTCCCTCAGACA
AACGTCTTTAACAATGCGGCTGGTGCAAACTGAACAATTCATGGATGCAGAACTTGAAGCGCTCCAAAAAGAGCTTCCGT
TTAGTGTACATGACGCAAATATTGGCATGGAGGGAATCACTCCATTTGATTTTATGCATGAGTAG

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (345-553)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	79.774	100	0.8