Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGC   Type   Machinery gene
Locus tag   NSU11_RS11430 Genome accession   NZ_CP151981
Coordinates   2262444..2262737 (-) Length   97 a.a.
NCBI ID   WP_024422977.1    Uniprot ID   A0A0M2EIN6
Organism   Bacillus sp. FSL R5-0712     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2257444..2267737
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSU11_RS11380 (NSU11_11380) sinR 2257604..2257939 (+) 336 WP_024422969.1 transcriptional regulator SinR Regulator
  NSU11_RS11385 (NSU11_11385) - 2258007..2258807 (-) 801 WP_024422970.1 TasA family protein -
  NSU11_RS11390 (NSU11_11390) - 2258862..2259434 (-) 573 WP_024422971.1 signal peptidase I -
  NSU11_RS11395 (NSU11_11395) tapA 2259487..2260014 (-) 528 WP_024422972.1 amyloid fiber anchoring/assembly protein TapA -
  NSU11_RS11400 (NSU11_11400) - 2260314..2260592 (+) 279 WP_171464609.1 DUF3889 domain-containing protein -
  NSU11_RS11405 (NSU11_11405) - 2260627..2260821 (-) 195 WP_024422974.1 YqzE family protein -
  NSU11_RS11410 (NSU11_11410) comGG 2260888..2261271 (-) 384 WP_151862661.1 competence type IV pilus minor pilin ComGG -
  NSU11_RS11415 (NSU11_11415) comGF 2261268..2261795 (-) 528 WP_342493582.1 competence type IV pilus minor pilin ComGF -
  NSU11_RS11420 (NSU11_11420) comGE 2261707..2262021 (-) 315 WP_283859498.1 competence type IV pilus minor pilin ComGE -
  NSU11_RS11425 (NSU11_11425) comGD 2262005..2262451 (-) 447 WP_024422976.1 competence type IV pilus minor pilin ComGD -
  NSU11_RS11430 (NSU11_11430) comGC 2262444..2262737 (-) 294 WP_024422977.1 competence type IV pilus major pilin ComGC Machinery gene
  NSU11_RS11435 (NSU11_11435) comGB 2262754..2263794 (-) 1041 WP_024422978.1 competence type IV pilus assembly protein ComGB -
  NSU11_RS11440 (NSU11_11440) comGA 2263775..2264845 (-) 1071 WP_025092972.1 competence type IV pilus ATPase ComGA Machinery gene
  NSU11_RS11445 (NSU11_11445) - 2265023..2265898 (-) 876 WP_024422979.1 STAS domain-containing protein -
  NSU11_RS11455 (NSU11_11455) - 2266122..2266502 (-) 381 WP_007501232.1 Spx/MgsR family RNA polymerase-binding regulatory protein -
  NSU11_RS11460 (NSU11_11460) - 2266715..2266957 (+) 243 WP_003217440.1 DUF2626 domain-containing protein -
  NSU11_RS11465 (NSU11_11465) - 2267005..2267643 (-) 639 WP_342493583.1 MBL fold metallo-hydrolase -

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10686.62 Da        Isoelectric Point: 7.3218

>NTDB_id=983253 NSU11_RS11430 WP_024422977.1 2262444..2262737(-) (comGC) [Bacillus sp. FSL R5-0712]
MNDKGFTLLEMLIVMLVISILLLITIPNITRHHQAIQAKGCEGLKSMVSTQVMAYELEHDGKTPSLAELEKEGYVKKGLT
CPNGKAIVIQNGNVKHE

Nucleotide


Download         Length: 294 bp        

>NTDB_id=983253 NSU11_RS11430 WP_024422977.1 2262444..2262737(-) (comGC) [Bacillus sp. FSL R5-0712]
ATGAATGATAAAGGATTTACCCTGTTAGAAATGTTAATAGTCATGCTCGTAATATCCATTCTTTTACTCATTACCATACC
GAATATCACACGTCATCACCAAGCGATTCAGGCAAAGGGCTGTGAAGGGCTTAAATCAATGGTCAGCACACAAGTGATGG
CATATGAATTGGAGCATGATGGGAAGACGCCATCTTTAGCTGAATTAGAAAAAGAAGGTTATGTCAAAAAGGGATTAACT
TGTCCTAATGGAAAAGCGATTGTCATTCAAAACGGCAACGTGAAGCATGAATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0M2EIN6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGC Bacillus subtilis subsp. subtilis str. 168

67.01

100

0.67
  comGC Staphylococcus aureus MW2

42.222

92.784

0.392
  comGC Staphylococcus aureus N315

42.222

92.784

0.392

Multiple sequence alignment