Detailed information NTG0983184

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ACN3VN_RS07455
• Genome accession: NZ_CP183396
• Coordinates: 1582461..1583750 (-)
• Length: 429 a.a.
• NCBI ID: WP_394325679.1
• Uniprot ID: -
• Organism: Xylella fastidiosa strain CFBP8074
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1577461..1588750

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN3VN_RS07435 (ACN3VN_07435)	-	1578347..1579084 (+)	738	WP_046419507.1	pteridine reductase	-
ACN3VN_RS07440 (ACN3VN_07440)	folK	1579095..1579610 (-)	516	WP_031336778.1	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	-
ACN3VN_RS07445 (ACN3VN_07445)	-	1579740..1581236 (-)	1497	WP_010893956.1	sensor histidine kinase	-
ACN3VN_RS07450 (ACN3VN_07450)	crcB	1581889..1582320 (-)	432	WP_031336780.1	fluoride efflux transporter CrcB	-
ACN3VN_RS07455 (ACN3VN_07455)	rarA	1582461..1583750 (-)	1290	WP_394325679.1	replication-associated recombination protein A	Machinery gene
ACN3VN_RS07460 (ACN3VN_07460)	-	1583961..1584587 (-)	627	WP_010893953.1	outer membrane lipoprotein carrier protein LolA	-
ACN3VN_RS07465 (ACN3VN_07465)	-	1585149..1587059 (-)	1911	WP_010893952.1	DUF3857 domain-containing transglutaminase family protein	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 47779.43 Da
• Isoelectric Point: 6.2939

>NTDB_id=983184 ACN3VN_RS07455 WP_394325679.1 1582461..1583750(-) (rarA) [Xylella fastidiosa strain CFBP8074]
MRPRTLHEMVGQKRLLAPDRALHRAVASGHVHSMILWGPPGCGKTTLSLLLAQYIDAEFHAVSAVLSGLPEVRQILAEAA
QRFSEGRRTVLFVDEVHRFNKMQQDAFLPHIERGSIIFVGATTENPSFELNSALLSRCRVHVLEAVSSQDIVVALQRALQ
DTERGLGEQKIEVSEASLLEIAKAADGDVRRALTLLEIAAELAQDEDGQMTADLLSQVLADRSRRFDKRGEQFYDQISAL
HKSVRSSNPDAALYWLLRMLDGGCDPIYLARRLTRMAIEDIGLADPRAQSMALEAWDIYERLGSPEGDLAFAQLVLYLAS
TAKSNAGYVAFNVAKEDIRQTGTQDVPLHLRNAPTRLMKSLGYGIEYQYDHDAENGVALEQTCFPDALGERIYYQPVSRG
LEIKLKEKLDQLRAARAQIQADKPQRPRA

Nucleotide

• Length: 1290 bp

>NTDB_id=983184 ACN3VN_RS07455 WP_394325679.1 1582461..1583750(-) (rarA) [Xylella fastidiosa strain CFBP8074]
ATGCGTCCTCGTACTCTTCATGAGATGGTAGGACAGAAGCGCTTGCTTGCCCCAGATCGTGCATTGCATCGTGCGGTGGC
TTCCGGACATGTGCATTCCATGATTTTGTGGGGACCGCCAGGGTGCGGCAAGACGACGTTGTCACTGCTGTTAGCGCAGT
ACATTGATGCAGAATTTCATGCAGTCTCGGCTGTTCTTTCGGGGTTGCCGGAGGTGCGTCAGATCTTGGCTGAGGCTGCG
CAGCGTTTTTCTGAAGGACGCCGCACCGTCTTGTTCGTGGACGAAGTGCATCGTTTTAACAAGATGCAGCAGGATGCGTT
TCTGCCGCATATTGAGCGTGGTTCCATTATTTTCGTTGGTGCCACTACTGAGAATCCATCTTTCGAATTGAACTCGGCGT
TACTGTCACGTTGCCGTGTCCACGTGTTGGAGGCAGTGTCGTCACAGGATATCGTTGTGGCATTGCAGCGGGCGTTGCAG
GATACGGAGCGGGGTTTGGGTGAGCAGAAGATTGAAGTGTCTGAAGCCTCTCTGTTGGAGATTGCCAAGGCTGCTGATGG
TGACGTGCGTCGTGCGCTCACCTTGTTGGAGATCGCTGCTGAGCTTGCCCAGGATGAGGATGGGCAGATGACCGCTGACT
TGCTTTCGCAAGTGCTTGCCGATCGTAGTCGGCGCTTCGACAAACGTGGGGAGCAGTTCTATGATCAGATTTCGGCCTTG
CACAAGAGTGTACGTAGTTCCAACCCGGATGCGGCGTTGTATTGGTTGCTGCGTATGCTGGATGGTGGTTGTGATCCTAT
CTACTTGGCGCGGCGCTTGACCCGCATGGCGATTGAGGATATCGGTTTGGCTGATCCGCGTGCACAGTCGATGGCTCTGG
AGGCTTGGGACATCTATGAGCGGTTGGGTAGCCCGGAGGGAGATCTGGCGTTCGCACAGTTGGTACTGTACTTGGCAAGT
ACTGCAAAATCGAATGCTGGCTATGTTGCGTTCAATGTGGCCAAGGAGGACATTCGCCAGACGGGTACCCAGGATGTTCC
GCTACACCTGCGTAATGCACCGACCAGACTCATGAAAAGTCTCGGTTACGGTATCGAGTATCAGTACGATCATGATGCTG
AGAATGGTGTTGCGCTGGAACAGACCTGTTTTCCCGATGCGCTGGGGGAGCGTATTTACTACCAGCCGGTATCCCGCGGT
CTGGAGATTAAGCTGAAGGAGAAGTTGGACCAGTTGCGTGCAGCACGCGCTCAGATTCAAGCGGATAAGCCGCAGCGGCC
GCGTGCATAG

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (34-142)

• AAA C-terminal domain (AAA_assoc_2) (168-245)

• MgsA AAA+ ATPase C terminal (MgsA_C) (247-412)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	38.462	96.97	0.373