Detailed information NTG0982823

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ACN2AT_RS14085
• Genome accession: NZ_CP183238
• Coordinates: 2701306..2702571 (+)
• Length: 421 a.a.
• NCBI ID: WP_004398500.1
• Uniprot ID: O34528
• Organism: Bacillus subtilis strain NDmed
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2696306..2707571

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN2AT_RS14065 (ACN2AT_13970)	yrrB	2697677..2698297 (-)	621	WP_010886584.1	tetratricopeptide repeat protein	-
ACN2AT_RS14070 (ACN2AT_13975)	mnmA	2698383..2699498 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACN2AT_RS14075 (ACN2AT_13980)	iscSA	2699529..2700668 (-)	1140	WP_003246057.1	cysteine desulfurase family protein	-
ACN2AT_RS14080 (ACN2AT_13985)	cymR	2700687..2701103 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
ACN2AT_RS14085 (ACN2AT_13990)	rarA	2701306..2702571 (+)	1266	WP_004398500.1	replication-associated recombination protein A	Machinery gene
ACN2AT_RS14090 (ACN2AT_13995)	tcdA	2702613..2703377 (-)	765	WP_003229763.1	tRNA threonylcarbamoyladenosine dehydratase	-
ACN2AT_RS14100 (ACN2AT_14005)	aspS	2703713..2705491 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
ACN2AT_RS14105 (ACN2AT_14010)	hisS	2705505..2706779 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
ACN2AT_RS14110 (ACN2AT_14015)	yrzK	2707161..2707331 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46514.38 Da
• Isoelectric Point: 7.2043

>NTDB_id=982823 ACN2AT_RS14085 WP_004398500.1 2701306..2702571(+) (rarA) [Bacillus subtilis strain NDmed]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=982823 ACN2AT_RS14085 WP_004398500.1 2701306..2702571(+) (rarA) [Bacillus subtilis strain NDmed]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

3D structure

• AlphaFold DB: O34528

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	100	1