Detailed information NTG0098128

Bioinformatically predicted

Overview

• Name: rexB
• Type: Machinery gene
• Locus tag: ABXG87_RS08585
• Genome accession: NZ_AP031488
• Coordinates: 1828923..1832243 (-)
• Length: 1106 a.a.
• NCBI ID: WP_353551489.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain NBRC 13956
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1823923..1837243

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXG87_RS08575 (Ssa13956_16320)	-	1824196..1824927 (+)	732	WP_013991143.1	DUF554 domain-containing protein	-
ABXG87_RS08580 (Ssa13956_16330)	rexA	1825280..1828933 (-)	3654	WP_353551487.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
ABXG87_RS08585 (Ssa13956_16340)	rexB	1828923..1832243 (-)	3321	WP_353551489.1	ATP-dependent nuclease subunit B	Machinery gene
ABXG87_RS08590 (Ssa13956_16350)	-	1832492..1833865 (-)	1374	WP_004183414.1	GHKL domain-containing protein	-
ABXG87_RS08595 (Ssa13956_16360)	-	1833901..1835211 (-)	1311	WP_014632632.1	hypothetical protein	-
ABXG87_RS08600 (Ssa13956_16370)	-	1835432..1836883 (-)	1452	WP_353551491.1	IS1182 family transposase	-

Sequence

Protein

• Length: 1106 a.a.
• Molecular weight: 126130.79 Da
• Isoelectric Point: 4.9645

>NTDB_id=98128 ABXG87_RS08585 WP_353551489.1 1828923..1832243(-) (rexB) [Streptococcus salivarius strain NBRC 13956]
MKLLYTDMSQDLTEILTEQATSYAQKGKRVFYIAPNALSFEKERKVLEYLPQSASFEITVTRFTQMVRYFILNTSNPKTQ
LDDTGLAMIFYKVLSHMDDDELKVYGRLRKDSNFINQLVDLYKELQQANMTVLDLQHLDQVEKQEDLLRIFSAAQDLLLA
GDFDNQSKLSAFFKEITSGHLDKALSNTVLVIDGFTRFSAEEEALVALLNDKCHQIVIGTYTSQKAYSANFVYGNVYQAS
VDFLRTLAQTYKVTPDYVTTDKEGNPSFARISRLLESRHDFSTIDEQLTAQDKQALQVWEVVNQKEEVAQVAKSIRQLLA
DGKRYKDILVLLGDEESYKLQVGQIFRKFDIPYYFGKEETMSSHPLVQFVDSLERIKRYNYRAEDLLNLIKSGLYGGFAQ
EDLDLFEYYVNFADIKGRHKFLSDFTANSRDKYDLDQLNALRSQLVEPLDKLLNSRKQKGSSLLKKLVVFLEAVQVPSKM
AALTGKASEAEKEQNEQVWKAFTQLFEQVETIFGEETLSVDDFLSILRSGMLACDYRTVPATVDVVNVKKYDLIQPHSAP
YVFALGMTQSHFPKVGQNKSLLSDEERSRINEATDEHRSLDIVTQSNSQRGHFVAMSLFNAASEQLVLSQPQILNETQDD
MSVYLKELLDLGLPLVEKGRNRFEAKGDQIGNYKDLLSTVIALNSSQLDADLDKETQTFWSVAVRYLRKRLDKDQVLIPN
VIDDVTTTKVDDRVMQLVFPGEEPLKLSASALTTFYNNQYLYFLRYVLGLEELESIHPDARHHGTYLHRVFERVMGDSSS
ENFDDKLEKAIAQTNQEQPFELLYTEDQEGRLSRQILEDIARSTASVLRDNAAVKVEREEAKFDLLLANSIKITGIIDRV
DRLTDGALGVVDYKSGKNVFDIQKFYNGLSPQLVTYLEALRQTYKVDADQLFGAMYLHMRDPQLNLAQFGLDKLAAQAHK
ELTYKGLFVASETEHLAGGNYDLQKTVTYDKEDLETLLEYNIKLFTGAAEIIRSGNFAVNPYTEDGKSVQGDQIKAITHF
EADRHMGQARKLLRLPSKGKKEAYLELMAKAKEDNRMLVAEKNIPFLVTDQAVIADKKDQEDNHVD

Nucleotide

• Length: 3321 bp

>NTDB_id=98128 ABXG87_RS08585 WP_353551489.1 1828923..1832243(-) (rexB) [Streptococcus salivarius strain NBRC 13956]
ATGAAATTACTTTATACGGATATGTCTCAGGATTTAACAGAAATTCTGACGGAGCAGGCAACCAGCTATGCTCAAAAGGG
AAAGAGGGTCTTTTATATTGCCCCTAATGCCCTGTCATTTGAGAAGGAGCGTAAGGTCTTGGAATACCTGCCTCAGTCAG
CATCCTTTGAGATTACGGTGACTCGTTTTACTCAGATGGTGAGATACTTTATTCTCAATACGAGCAACCCAAAGACTCAG
CTGGATGATACTGGTCTGGCAATGATTTTTTACAAGGTGTTGTCGCATATGGACGATGATGAGCTCAAGGTTTATGGCCG
TTTGCGCAAGGATAGTAACTTTATTAATCAATTGGTGGACCTTTACAAAGAGTTGCAGCAGGCTAATATGACGGTTCTGG
ATTTGCAGCATTTGGATCAGGTTGAGAAACAAGAGGATTTGCTCAGGATTTTCAGTGCAGCTCAGGACCTCTTGTTGGCA
GGAGATTTTGATAATCAATCAAAACTTAGTGCCTTCTTCAAGGAAATTACCTCAGGACATCTGGATAAGGCACTGAGTAA
TACGGTTTTGGTCATTGATGGCTTTACGCGTTTCTCTGCCGAGGAGGAGGCCCTAGTTGCCCTCTTGAATGATAAGTGCC
ACCAAATTGTCATTGGGACTTATACCAGTCAAAAAGCTTATAGTGCTAACTTTGTTTACGGCAATGTTTATCAGGCTTCA
GTGGATTTTCTGAGAACTCTGGCTCAGACCTATAAGGTGACACCCGACTATGTGACGACAGACAAAGAGGGGAATCCTTC
TTTTGCACGTATTAGCCGTCTTTTGGAGAGCCGTCATGATTTTAGTACGATTGACGAGCAGCTGACTGCTCAGGACAAGC
AAGCTTTGCAGGTTTGGGAAGTGGTCAACCAAAAGGAAGAAGTGGCTCAGGTTGCTAAGAGTATTCGTCAGTTGCTAGCA
GATGGCAAGCGCTATAAGGATATCTTGGTCTTGCTAGGTGATGAGGAGAGTTATAAGCTTCAGGTGGGTCAGATTTTTCG
AAAATTTGATATTCCCTATTATTTCGGTAAGGAAGAAACCATGTCTAGCCATCCTTTGGTGCAGTTTGTGGATTCCTTGG
AGCGGATCAAACGCTACAATTACCGTGCTGAGGATTTACTTAATCTCATAAAATCCGGTCTCTATGGTGGTTTTGCTCAA
GAGGATTTAGACCTTTTTGAGTATTATGTCAATTTTGCAGATATCAAGGGGCGTCACAAGTTCCTTTCTGATTTCACGGC
TAATAGTCGTGATAAGTATGATTTGGACCAGCTCAATGCCTTGAGGTCACAACTGGTAGAGCCTTTGGACAAGTTGCTTA
ACAGTCGCAAACAGAAGGGGTCTAGTCTGCTCAAAAAACTTGTGGTCTTTTTAGAGGCTGTGCAAGTGCCAAGTAAGATG
GCTGCTTTGACTGGCAAGGCCAGTGAGGCCGAAAAAGAGCAGAATGAACAGGTCTGGAAGGCCTTCACGCAACTCTTTGA
GCAGGTTGAGACAATCTTTGGTGAAGAAACACTATCAGTAGATGACTTTTTGTCTATTTTGCGTTCGGGCATGTTGGCCT
GTGATTACCGTACGGTGCCAGCTACAGTCGATGTGGTCAATGTGAAGAAATACGATTTGATTCAGCCACATTCAGCTCCT
TATGTTTTTGCCTTGGGAATGACCCAGTCGCATTTTCCTAAGGTAGGGCAAAATAAGAGTCTCCTGTCTGACGAGGAACG
TAGTCGTATCAATGAAGCTACGGACGAGCACAGAAGTTTGGATATTGTTACGCAGAGCAATAGTCAGCGGGGGCATTTCG
TGGCTATGTCACTTTTTAATGCGGCTAGTGAACAATTGGTGCTTAGTCAGCCACAAATTCTCAATGAGACACAGGATGAC
ATGTCGGTTTATTTGAAGGAACTTCTTGATCTTGGTCTTCCTTTGGTTGAAAAGGGACGCAATCGTTTCGAGGCTAAAGG
TGACCAGATTGGAAACTACAAGGACCTCTTGTCGACTGTCATTGCCCTTAATAGCAGTCAGCTAGATGCTGATTTGGATA
AGGAAACGCAGACTTTCTGGTCTGTTGCTGTGCGTTATCTCCGTAAGCGACTTGATAAGGACCAAGTCTTGATTCCAAAT
GTGATTGACGATGTGACGACGACTAAGGTTGATGATCGGGTCATGCAGCTGGTCTTTCCGGGGGAAGAACCACTGAAATT
ATCAGCCTCGGCTCTGACGACCTTCTATAACAACCAATATCTTTATTTTTTGCGTTATGTTTTGGGGCTTGAAGAGTTGG
AGTCCATCCATCCAGATGCTCGACACCACGGGACTTACTTGCACCGTGTCTTTGAGCGTGTTATGGGGGATTCTTCGTCA
GAAAACTTCGATGATAAATTGGAAAAGGCTATTGCTCAGACCAATCAGGAACAGCCCTTTGAACTTCTCTATACAGAGGA
TCAAGAGGGTCGCTTGTCTCGTCAGATTTTAGAAGATATCGCCCGTTCAACTGCCAGTGTTTTGCGTGACAATGCGGCTG
TTAAGGTTGAGCGTGAGGAAGCCAAGTTTGATTTGCTTTTAGCAAATAGCATAAAGATTACAGGGATTATTGACCGTGTG
GACCGTTTAACGGATGGGGCTTTGGGTGTCGTTGACTACAAGTCAGGTAAAAATGTTTTTGATATTCAAAAATTCTACAA
TGGCCTCAGTCCGCAATTGGTGACCTATCTGGAGGCCCTTCGACAAACCTATAAAGTCGATGCTGACCAGCTTTTTGGTG
CCATGTATCTTCACATGCGGGACCCACAGCTTAACTTGGCTCAGTTTGGCTTGGACAAGCTAGCGGCTCAGGCTCATAAG
GAATTGACCTATAAGGGACTCTTTGTGGCTTCAGAGACGGAGCATCTGGCTGGTGGAAACTATGATTTACAAAAGACTGT
CACCTACGACAAGGAGGACCTAGAGACCTTGTTAGAATACAATATCAAGCTCTTTACAGGTGCTGCTGAGATTATTCGTA
GTGGGAATTTTGCGGTCAATCCTTATACCGAAGATGGCAAGTCTGTTCAAGGGGATCAAATCAAGGCTATTACACATTTC
GAGGCCGACCGCCACATGGGACAAGCTCGAAAACTCCTGCGTTTACCAAGTAAGGGTAAGAAGGAAGCCTATTTGGAGCT
GATGGCAAAAGCTAAAGAAGATAATCGGATGCTAGTTGCTGAAAAAAACATCCCCTTTCTAGTCACGGATCAAGCTGTGA
TAGCAGACAAAAAAGACCAGGAGGACAACCATGTTGACTAA

Domains

Predicted by InterProScan.

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (747-1023)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rexB	Streptococcus pneumoniae R6	43.434	98.463	0.428