Detailed information NTG0981228

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ACNFKJ_RS00985
• Genome accession: NZ_CP182514
• Coordinates: 200893..202167 (+)
• Length: 424 a.a.
• NCBI ID: WP_000102741.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain subspecie aureus F-182
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 195893..207167

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNFKJ_RS00955	mnmA	196109..197227 (-)	1119	WP_000066097.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACNFKJ_RS00960	-	197228..198370 (-)	1143	WP_000409167.1	cysteine desulfurase family protein	-
ACNFKJ_RS00965	-	198680..199681 (+)	1002	WP_102695861.1	LLM class flavin-dependent oxidoreductase	-
ACNFKJ_RS00970	-	199918..200064 (-)	147	WP_000008061.1	SAS049 family protein	-
ACNFKJ_RS00975	-	200104..200286 (-)	183	WP_000752909.1	CsbD family protein	-
ACNFKJ_RS00980	cymR	200386..200808 (-)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
ACNFKJ_RS00985	rarA	200893..202167 (+)	1275	WP_000102741.1	replication-associated recombination protein A	Machinery gene
ACNFKJ_RS00990	-	202328..203101 (-)	774	WP_000682640.1	tRNA threonylcarbamoyladenosine dehydratase	-
ACNFKJ_RS00995	-	203101..203229 (-)	129	WP_001791215.1	hypothetical protein	-
ACNFKJ_RS01005	aspS	203562..205328 (-)	1767	WP_000044796.1	aspartate--tRNA ligase	-
ACNFKJ_RS01010	hisS	205344..206606 (-)	1263	WP_000590826.1	histidine--tRNA ligase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47292.90 Da
• Isoelectric Point: 8.6816

>NTDB_id=981228 ACNFKJ_RS00985 WP_000102741.1 200893..202167(+) (rarA) [Staphylococcus aureus strain subspecie aureus F-182]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDEENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSERQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=981228 ACNFKJ_RS00985 WP_000102741.1 200893..202167(+) (rarA) [Staphylococcus aureus strain subspecie aureus F-182]
GTGAGTACAGAACCATTAGCGTCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACACTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGACACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATCCATCGACTAGATAAAGC
CAAACAAGATTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTCGAGTTATATCCTTTAAATGACGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGAAGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGTCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAGGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGCTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATCCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATTTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACGACAACTCAAAGAAATATATAACAATTTACTTAAACAAAGGCCATAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

• AAA C-terminal domain (AAA_assoc_2) (175-253)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.286	99.057	0.686