Detailed information NTG0980641

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AAFA19_RS08270
• Genome accession: NZ_CP151719
• Coordinates: 1710355..1711056 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594572.1
• Uniprot ID: A0A009IN88
• Organism: Acinetobacter baumannii strain F14-11
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1705355..1716056

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAFA19_RS08235 (AAFA19_08235)	kdsB	1705878..1706639 (+)	762	WP_000680701.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
AAFA19_RS08240 (AAFA19_08240)	-	1706651..1707631 (+)	981	WP_001075418.1	DNA polymerase III subunit delta'	-
AAFA19_RS08245 (AAFA19_08245)	-	1707643..1707984 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
AAFA19_RS08250 (AAFA19_08250)	-	1708002..1708775 (+)	774	WP_000497298.1	TatD family hydrolase	-
AAFA19_RS08255 (AAFA19_08255)	-	1708813..1709421 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
AAFA19_RS08260 (AAFA19_08260)	-	1709431..1709985 (+)	555	WP_000841379.1	type II secretion system protein	-
AAFA19_RS08265 (AAFA19_08265)	xcpV	1709975..1710355 (+)	381	WP_000836910.1	type II secretion system minor pseudopilin GspI	Machinery gene
AAFA19_RS08270 (AAFA19_08270)	xcpW	1710355..1711056 (+)	702	WP_000594572.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AAFA19_RS08275 (AAFA19_08275)	gspK	1711056..1712015 (+)	960	WP_000301481.1	type II secretion system minor pseudopilin GspK	-
AAFA19_RS08280 (AAFA19_08280)	-	1712245..1712841 (+)	597	WP_000908451.1	6-carboxytetrahydropterin synthase	-
AAFA19_RS08285 (AAFA19_08285)	ung	1712892..1713605 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
AAFA19_RS08290 (AAFA19_08290)	-	1713602..1714726 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
AAFA19_RS08295 (AAFA19_08295)	tadA	1714733..1715236 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
AAFA19_RS08300 (AAFA19_08300)	-	1715306..1715749 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26613.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=980641 AAFA19_RS08270 WP_000594572.1 1710355..1711056(+) (xcpW) [Acinetobacter baumannii strain F14-11]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=980641 AAFA19_RS08270 WP_000594572.1 1710355..1711056(+) (xcpW) [Acinetobacter baumannii strain F14-11]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATAGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009IN88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991