Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | AAFA16_RS17120 | Genome accession | NZ_CP151715 |
| Coordinates | 3572279..3572704 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788337.1 | Uniprot ID | A0A009SG52 |
| Organism | Acinetobacter baumannii strain F15-01B | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3567279..3577704
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAFA16_RS17090 (AAFA16_17090) | - | 3567811..3568842 (+) | 1032 | Protein_3341 | lipase secretion chaperone | - |
| AAFA16_RS17095 (AAFA16_17095) | - | 3568957..3569898 (+) | 942 | WP_085943974.1 | triacylglycerol lipase | - |
| AAFA16_RS17100 (AAFA16_17100) | rplS | 3569951..3570319 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| AAFA16_RS17105 (AAFA16_17105) | trmD | 3570527..3571267 (-) | 741 | WP_000464599.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| AAFA16_RS17110 (AAFA16_17110) | rimM | 3571313..3571861 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| AAFA16_RS17115 (AAFA16_17115) | rpsP | 3571881..3572132 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| AAFA16_RS17120 (AAFA16_17120) | pilE | 3572279..3572704 (-) | 426 | WP_000788337.1 | type IV pilin protein | Machinery gene |
| AAFA16_RS17125 (AAFA16_17125) | pilY2 | 3572701..3573183 (-) | 483 | WP_001046423.1 | type IV pilin protein | Machinery gene |
| AAFA16_RS17130 (AAFA16_17130) | pilY1 | 3573196..3577050 (-) | 3855 | WP_000768954.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15163.36 Da Isoelectric Point: 7.8144
>NTDB_id=980556 AAFA16_RS17120 WP_000788337.1 3572279..3572704(-) (pilE) [Acinetobacter baumannii strain F15-01B]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=980556 AAFA16_RS17120 WP_000788337.1 3572279..3572704(-) (pilE) [Acinetobacter baumannii strain F15-01B]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.78 |
100 |
0.908 |
| comF | Acinetobacter baylyi ADP1 |
50 |
99.291 |
0.496 |