Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | AAFA21_RS17105 | Genome accession | NZ_CP151709 |
| Coordinates | 3569361..3569786 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788337.1 | Uniprot ID | A0A009SG52 |
| Organism | Acinetobacter baumannii strain F16-05 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3564361..3574786
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAFA21_RS17075 (AAFA21_17075) | - | 3564893..3565924 (+) | 1032 | Protein_3338 | lipase secretion chaperone | - |
| AAFA21_RS17080 (AAFA21_17080) | - | 3566039..3566980 (+) | 942 | WP_085943974.1 | triacylglycerol lipase | - |
| AAFA21_RS17085 (AAFA21_17085) | rplS | 3567033..3567401 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| AAFA21_RS17090 (AAFA21_17090) | trmD | 3567609..3568349 (-) | 741 | WP_000464599.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| AAFA21_RS17095 (AAFA21_17095) | rimM | 3568395..3568943 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| AAFA21_RS17100 (AAFA21_17100) | rpsP | 3568963..3569214 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| AAFA21_RS17105 (AAFA21_17105) | pilE | 3569361..3569786 (-) | 426 | WP_000788337.1 | type IV pilin protein | Machinery gene |
| AAFA21_RS17110 (AAFA21_17110) | pilY2 | 3569783..3570265 (-) | 483 | WP_001046423.1 | type IV pilin protein | Machinery gene |
| AAFA21_RS17115 (AAFA21_17115) | pilY1 | 3570278..3574132 (-) | 3855 | WP_000768954.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15163.36 Da Isoelectric Point: 7.8144
>NTDB_id=980415 AAFA21_RS17105 WP_000788337.1 3569361..3569786(-) (pilE) [Acinetobacter baumannii strain F16-05]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=980415 AAFA21_RS17105 WP_000788337.1 3569361..3569786(-) (pilE) [Acinetobacter baumannii strain F16-05]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.78 |
100 |
0.908 |
| comF | Acinetobacter baylyi ADP1 |
50 |
99.291 |
0.496 |