Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | AAFA17_RS16785 | Genome accession | NZ_CP151707 |
| Coordinates | 3527059..3527484 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788337.1 | Uniprot ID | A0A009SG52 |
| Organism | Acinetobacter baumannii strain F18-02 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3522059..3532484
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAFA17_RS16755 (AAFA17_16755) | - | 3522591..3523622 (+) | 1032 | Protein_3274 | lipase secretion chaperone | - |
| AAFA17_RS16760 (AAFA17_16760) | - | 3523737..3524678 (+) | 942 | WP_085943974.1 | triacylglycerol lipase | - |
| AAFA17_RS16765 (AAFA17_16765) | rplS | 3524731..3525099 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| AAFA17_RS16770 (AAFA17_16770) | trmD | 3525307..3526047 (-) | 741 | WP_000464599.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| AAFA17_RS16775 (AAFA17_16775) | rimM | 3526093..3526641 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| AAFA17_RS16780 (AAFA17_16780) | rpsP | 3526661..3526912 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| AAFA17_RS16785 (AAFA17_16785) | pilE | 3527059..3527484 (-) | 426 | WP_000788337.1 | type IV pilin protein | Machinery gene |
| AAFA17_RS16790 (AAFA17_16790) | pilY2 | 3527481..3527963 (-) | 483 | WP_001046423.1 | type IV pilin protein | Machinery gene |
| AAFA17_RS16795 (AAFA17_16795) | pilY1 | 3527976..3531830 (-) | 3855 | WP_000768954.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15163.36 Da Isoelectric Point: 7.8144
>NTDB_id=980368 AAFA17_RS16785 WP_000788337.1 3527059..3527484(-) (pilE) [Acinetobacter baumannii strain F18-02]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=980368 AAFA17_RS16785 WP_000788337.1 3527059..3527484(-) (pilE) [Acinetobacter baumannii strain F18-02]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.78 |
100 |
0.908 |
| comF | Acinetobacter baylyi ADP1 |
50 |
99.291 |
0.496 |