Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | AAFA26_RS16475 | Genome accession | NZ_CP151705 |
| Coordinates | 3482928..3483353 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788337.1 | Uniprot ID | A0A009SG52 |
| Organism | Acinetobacter baumannii strain F19-02 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3477928..3488353
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAFA26_RS16445 (AAFA26_16445) | - | 3478460..3479491 (+) | 1032 | Protein_3212 | lipase secretion chaperone | - |
| AAFA26_RS16450 (AAFA26_16450) | - | 3479606..3480547 (+) | 942 | WP_085943974.1 | triacylglycerol lipase | - |
| AAFA26_RS16455 (AAFA26_16455) | rplS | 3480600..3480968 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| AAFA26_RS16460 (AAFA26_16460) | trmD | 3481176..3481916 (-) | 741 | WP_000464599.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| AAFA26_RS16465 (AAFA26_16465) | rimM | 3481962..3482510 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| AAFA26_RS16470 (AAFA26_16470) | rpsP | 3482530..3482781 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| AAFA26_RS16475 (AAFA26_16475) | pilE | 3482928..3483353 (-) | 426 | WP_000788337.1 | type IV pilin protein | Machinery gene |
| AAFA26_RS16480 (AAFA26_16480) | pilY2 | 3483350..3483832 (-) | 483 | WP_001046423.1 | type IV pilin protein | Machinery gene |
| AAFA26_RS16485 (AAFA26_16485) | pilY1 | 3483845..3487699 (-) | 3855 | WP_000768954.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15163.36 Da Isoelectric Point: 7.8144
>NTDB_id=980321 AAFA26_RS16475 WP_000788337.1 3482928..3483353(-) (pilE) [Acinetobacter baumannii strain F19-02]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=980321 AAFA26_RS16475 WP_000788337.1 3482928..3483353(-) (pilE) [Acinetobacter baumannii strain F19-02]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.78 |
100 |
0.908 |
| comF | Acinetobacter baylyi ADP1 |
50 |
99.291 |
0.496 |