Detailed information NTG0980271

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AAFA23_RS11180
• Genome accession: NZ_CP151704
• Coordinates: 2334023..2334724 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594572.1
• Uniprot ID: A0A009IN88
• Organism: Acinetobacter baumannii strain F19-10-2
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2329023..2339724

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAFA23_RS11150 (AAFA23_11150)	-	2329330..2329773 (-)	444	WP_001246675.1	SRPBCC family protein	-
AAFA23_RS11155 (AAFA23_11155)	tadA	2329843..2330346 (-)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
AAFA23_RS11160 (AAFA23_11160)	-	2330353..2331477 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
AAFA23_RS11165 (AAFA23_11165)	ung	2331474..2332187 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
AAFA23_RS11170 (AAFA23_11170)	-	2332238..2332834 (-)	597	WP_000908451.1	6-carboxytetrahydropterin synthase	-
AAFA23_RS11175 (AAFA23_11175)	gspK	2333064..2334023 (-)	960	WP_000301481.1	type II secretion system minor pseudopilin GspK	-
AAFA23_RS11180 (AAFA23_11180)	xcpW	2334023..2334724 (-)	702	WP_000594572.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AAFA23_RS11185 (AAFA23_11185)	xcpV	2334724..2335104 (-)	381	WP_000836910.1	type II secretion system minor pseudopilin GspI	Machinery gene
AAFA23_RS11190 (AAFA23_11190)	-	2335094..2335648 (-)	555	WP_000841379.1	type II secretion system protein	-
AAFA23_RS11195 (AAFA23_11195)	-	2335658..2336266 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
AAFA23_RS11200 (AAFA23_11200)	-	2336304..2337077 (-)	774	WP_000497298.1	TatD family hydrolase	-
AAFA23_RS11205 (AAFA23_11205)	-	2337095..2337436 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
AAFA23_RS11210 (AAFA23_11210)	-	2337448..2338428 (-)	981	WP_001075418.1	DNA polymerase III subunit delta'	-
AAFA23_RS11215 (AAFA23_11215)	kdsB	2338440..2339201 (-)	762	WP_000680701.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26613.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=980271 AAFA23_RS11180 WP_000594572.1 2334023..2334724(-) (xcpW) [Acinetobacter baumannii strain F19-10-2]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=980271 AAFA23_RS11180 WP_000594572.1 2334023..2334724(-) (xcpW) [Acinetobacter baumannii strain F19-10-2]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATAGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009IN88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991