Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | AAFA28_RS02505 | Genome accession | NZ_CP151699 |
| Coordinates | 527399..527824 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788337.1 | Uniprot ID | A0A009SG52 |
| Organism | Acinetobacter baumannii strain F19-10-9 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 522399..532824
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAFA28_RS02495 (AAFA28_02495) | pilY1 | 523053..526907 (+) | 3855 | WP_000768954.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| AAFA28_RS02500 (AAFA28_02500) | pilY2 | 526920..527402 (+) | 483 | WP_001046423.1 | type IV pilin protein | Machinery gene |
| AAFA28_RS02505 (AAFA28_02505) | pilE | 527399..527824 (+) | 426 | WP_000788337.1 | type IV pilin protein | Machinery gene |
| AAFA28_RS02510 (AAFA28_02510) | rpsP | 527971..528222 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| AAFA28_RS02515 (AAFA28_02515) | rimM | 528242..528790 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| AAFA28_RS02520 (AAFA28_02520) | trmD | 528836..529576 (+) | 741 | WP_000464599.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| AAFA28_RS02525 (AAFA28_02525) | rplS | 529784..530152 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| AAFA28_RS02530 (AAFA28_02530) | - | 530205..531146 (-) | 942 | WP_085943974.1 | triacylglycerol lipase | - |
| AAFA28_RS02535 (AAFA28_02535) | - | 531261..532292 (-) | 1032 | Protein_486 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15163.36 Da Isoelectric Point: 7.8144
>NTDB_id=980123 AAFA28_RS02505 WP_000788337.1 527399..527824(+) (pilE) [Acinetobacter baumannii strain F19-10-9]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=980123 AAFA28_RS02505 WP_000788337.1 527399..527824(+) (pilE) [Acinetobacter baumannii strain F19-10-9]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.78 |
100 |
0.908 |
| comF | Acinetobacter baylyi ADP1 |
50 |
99.291 |
0.496 |