Detailed information NTG0097995

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ABXH21_RS00550
• Genome accession: NZ_AP031472
• Coordinates: 115587..116873 (-)
• Length: 428 a.a.
• NCBI ID: WP_353551619.1
• Uniprot ID: -
• Organism: Moraxella osloensis strain NBRC 115781
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 110587..121873

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXH21_RS00530 (SKB0120_01000)	-	111760..112734 (+)	975	WP_198510450.1	acyl-CoA thioesterase II	-
ABXH21_RS00535 (SKB0120_01010)	-	112799..113272 (+)	474	WP_099833342.1	acyl-CoA thioesterase	-
ABXH21_RS00540 (SKB0120_01020)	ribBA	113353..114468 (-)	1116	WP_204155123.1	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	-
ABXH21_RS00545 (SKB0120_01030)	-	114923..115576 (+)	654	WP_099833344.1	BLUF domain-containing protein	-
ABXH21_RS00550 (SKB0120_01040)	rarA	115587..116873 (-)	1287	WP_353551619.1	replication-associated recombination protein A	Machinery gene
ABXH21_RS00555 (SKB0120_01060)	-	117451..119442 (+)	1992	WP_095356477.1	TolC family protein	-
ABXH21_RS00560 (SKB0120_01070)	-	119489..120712 (+)	1224	WP_353551621.1	efflux RND transporter periplasmic adaptor subunit	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46800.44 Da
• Isoelectric Point: 6.2418

>NTDB_id=97995 ABXH21_RS00550 WP_353551619.1 115587..116873(-) (rarA) [Moraxella osloensis strain NBRC 115781]
MMNQLAQIPLAQRVRPKSLDEVIGQTHLLGAKAPIRRIIEQGYLPSIILHGEAGIGKTTLAMLLADAVGRPFRPLSAINA
GVKELREVLAKDDGLFGEPPVVFVDEIHRFNKAQQDALLGAVESGDITLIGATTENPSFSVNNALLSRCQVYRLSPLSED
EISQVLQRAIDDDAVFKQFKIEIQSSQAIFALSQGDARKALNLLELAIQSSPNFKQGSQSPIVVTDDSVIAVAGASLVRY
DKSGDGHYDLVSAMIKSVRGSDPDAALYWMARMLTAGEDPAFIARRLVILASEDIGLANPNALLLADTALRSVQSIGMPE
ARIILGQAVVYLATSPKSNSSYQAINKAMRLAENDQSPVPLHLRNGVTKLMRAEGYGANYIYPHDYPNHYHPQQYLPDNL
MGTRLFDFADNAKEQQTYAFIQWLKGNH

Nucleotide

• Length: 1287 bp

>NTDB_id=97995 ABXH21_RS00550 WP_353551619.1 115587..116873(-) (rarA) [Moraxella osloensis strain NBRC 115781]
ATGATGAATCAACTCGCTCAAATCCCCCTTGCCCAACGTGTCCGCCCAAAGTCGCTTGACGAGGTAATCGGACAAACCCA
CTTGCTCGGTGCTAAAGCACCGATTCGCCGTATCATTGAGCAAGGTTACTTACCCTCGATTATTTTGCATGGCGAAGCAG
GCATTGGCAAAACCACCCTAGCCATGCTATTAGCCGATGCAGTGGGTCGTCCTTTTCGCCCGCTCTCGGCTATCAATGCA
GGGGTCAAAGAGCTGCGTGAAGTACTGGCAAAAGATGACGGCTTGTTTGGTGAGCCGCCGGTGGTATTTGTCGATGAGAT
TCATCGGTTTAACAAAGCCCAGCAAGACGCACTTCTCGGCGCGGTTGAGTCTGGGGATATTACTTTAATTGGTGCGACCA
CTGAAAATCCCTCGTTTAGTGTCAACAATGCCCTATTGTCCCGTTGCCAAGTATATCGGCTCAGCCCCTTGAGCGAGGAT
GAAATCAGCCAAGTACTACAACGTGCCATTGACGATGATGCAGTTTTTAAACAATTTAAGATTGAAATACAATCAAGCCA
AGCGATTTTTGCGCTATCGCAAGGCGATGCGCGTAAGGCGTTAAATTTACTTGAACTCGCCATTCAATCAAGCCCCAATT
TTAAGCAAGGCAGCCAGTCACCGATTGTGGTGACTGATGACAGTGTCATCGCGGTGGCAGGTGCAAGCCTGGTACGCTAC
GACAAATCAGGTGATGGTCATTATGACCTAGTGTCAGCGATGATTAAATCAGTCCGCGGCAGTGACCCTGATGCGGCACT
GTATTGGATGGCGCGGATGCTGACAGCGGGCGAAGACCCTGCCTTTATTGCACGGCGGTTGGTGATTTTGGCAAGTGAAG
ATATCGGACTTGCCAATCCCAATGCGTTACTACTTGCCGATACCGCCCTGCGAAGCGTGCAGAGCATCGGTATGCCTGAA
GCGCGGATTATTTTGGGGCAAGCGGTGGTGTATTTGGCGACATCGCCGAAGTCCAATTCTAGTTATCAGGCGATCAATAA
AGCGATGCGACTGGCAGAAAATGACCAATCGCCTGTACCGCTACATTTGCGTAATGGCGTCACCAAGCTGATGCGCGCCG
AAGGTTATGGTGCCAATTATATCTATCCGCACGACTACCCCAACCATTACCACCCACAGCAGTATCTGCCTGATAATTTG
ATGGGCACACGGTTGTTTGACTTTGCTGATAATGCCAAAGAACAGCAAACCTATGCCTTTATACAGTGGTTAAAGGGCAA
TCATTGA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (260-424)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (14-130)

• AAA C-terminal domain (AAA_assoc_2) (178-259)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.43	98.364	0.388