Detailed information NTG0979690

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: AADZ70_RS08365
• Genome accession: NZ_CP151679
• Coordinates: 1680845..1683223 (-)
• Length: 792 a.a.
• NCBI ID: WP_049627096.1
• Uniprot ID: A0AAE2NYB7
• Organism: Bacillus sp. YBsi01
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1675845..1688223

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AADZ70_RS08330 (AADZ70_08330)	-	1676917..1677645 (+)	729	WP_342007979.1	amino acid ABC transporter ATP-binding protein	-
AADZ70_RS08335 (AADZ70_08335)	-	1677666..1678493 (+)	828	WP_095241562.1	transporter substrate-binding domain-containing protein	-
AADZ70_RS08340 (AADZ70_08340)	-	1678550..1679200 (+)	651	WP_045926793.1	amino acid ABC transporter permease	-
AADZ70_RS08345 (AADZ70_08345)	-	1679219..1679875 (+)	657	WP_016938827.1	amino acid ABC transporter permease	-
AADZ70_RS08350 (AADZ70_08350)	-	1679911..1680042 (-)	132	WP_003152741.1	YrzQ family protein	-
AADZ70_RS08355 (AADZ70_08355)	-	1680064..1680255 (-)	192	WP_003152738.1	hypothetical protein	-
AADZ70_RS08360 (AADZ70_08360)	-	1680268..1680726 (-)	459	WP_264818885.1	hypothetical protein	-
AADZ70_RS08365 (AADZ70_08365)	recD2	1680845..1683223 (-)	2379	WP_049627096.1	ATP-dependent RecD-like DNA helicase	Machinery gene
AADZ70_RS08370 (AADZ70_08370)	-	1683242..1683862 (-)	621	WP_099744802.1	tetratricopeptide repeat protein	-
AADZ70_RS08375 (AADZ70_08375)	mnmA	1683950..1685065 (-)	1116	WP_016938823.1	tRNA 2-thiouridine(34) synthase MnmA	-
AADZ70_RS08380 (AADZ70_08380)	-	1685102..1686241 (-)	1140	WP_016938822.1	cysteine desulfurase family protein	-
AADZ70_RS08385 (AADZ70_08385)	cymR	1686261..1686677 (-)	417	WP_003152730.1	cysteine metabolism transcriptional regulator CymR	-
AADZ70_RS08390 (AADZ70_08390)	-	1686872..1688137 (+)	1266	WP_016938821.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 792 a.a.
• Molecular weight: 88259.91 Da
• Isoelectric Point: 4.9490

>NTDB_id=979690 AADZ70_RS08365 WP_049627096.1 1680845..1683223(-) (recD2) [Bacillus sp. YBsi01]
MDQLNIEEQPYVKGVIHTVIYHNDTNLYTVLKVKVAETSEAIEDKVVSVTGYFPLLQEDETYTFYGKTATHPKFGLQFQA
EHFKKEIPTTKEGIIHYLSSDLFEGIGKKTAEEIVKKLGDGALNKILADASVLYDVPKMSKKKADKLAGELQRHQGLEQI
MISLNQYGFGPQLSMKIYQAYETETLEKIQENPYQLVKDVEGIGFVKADELGGKMGLSGNHPERVKAAILYTIESTCLSE
GHTYIETKQLIINTQTLLNQSAEGGRVTEMDAADGIIALGESKDIVIEGERCYFPSLFYAEQNVAKRVLDIAAQTEYADQ
FPESEFLLALGELEERMNVQYAPSQKDAIQKALSSPMLLLTGGPGTGKTTVIKGIVELYSELHGVSLDPGDYKKDEAFPV
LLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTYNEDQPIEGKLIIIDEASMLDIWLASHLFKALPKHIQLIVVGD
EDQLPSVGPGQVLRDLLASEVLPTVRLTDIYRQAEGSSIVELAHDMKKGLLPKGLTAPTKDRSFIRCNSSQIKEVVDQVV
SNALKKGYTSKDIQVLAPMYRGKAGINELNVLLQDIMNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGDIGEIV
SIFYAKENTEKEDMVVVSFDGNEITFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITRAKKF
LILCGEEEALEWGVKNNDATVRQTSLKNRLTEQTEEMDAELAALQKELPFSVYDANIGMEGITPFDFMEEKA

Nucleotide

• Length: 2379 bp

>NTDB_id=979690 AADZ70_RS08365 WP_049627096.1 1680845..1683223(-) (recD2) [Bacillus sp. YBsi01]
GTGGATCAGCTGAACATCGAGGAACAGCCGTATGTAAAAGGCGTCATTCATACGGTCATTTACCACAATGACACCAACCT
GTATACAGTGCTGAAAGTCAAGGTTGCAGAAACGTCTGAGGCGATCGAAGACAAGGTCGTATCCGTAACGGGCTACTTCC
CTCTGCTGCAAGAAGATGAGACTTACACATTTTACGGAAAAACCGCCACACACCCCAAGTTCGGCCTGCAATTTCAGGCT
GAACACTTTAAAAAAGAAATTCCGACCACAAAAGAAGGGATCATTCACTATTTATCAAGTGATCTGTTTGAAGGAATCGG
GAAAAAAACGGCGGAAGAAATCGTCAAAAAGCTTGGAGACGGCGCGCTCAATAAAATTCTGGCTGATGCATCGGTGCTTT
ATGATGTGCCGAAAATGTCGAAAAAGAAAGCGGACAAACTGGCGGGAGAGCTGCAGCGGCATCAGGGGCTTGAACAGATT
ATGATTTCTCTGAACCAATACGGTTTCGGACCTCAGCTTTCCATGAAAATTTATCAGGCTTACGAAACGGAAACCTTGGA
GAAAATTCAGGAAAATCCTTATCAGCTTGTAAAAGACGTGGAAGGCATCGGTTTTGTGAAAGCCGACGAGCTGGGCGGGA
AAATGGGGCTGTCAGGAAACCACCCGGAGCGGGTCAAAGCGGCTATCTTATATACGATCGAATCAACCTGTCTTTCAGAA
GGCCATACGTACATAGAGACAAAGCAGCTGATTATCAATACGCAAACGCTTCTGAATCAGTCAGCTGAAGGCGGCCGCGT
CACGGAAATGGATGCGGCTGACGGCATCATCGCCCTCGGGGAGAGTAAGGACATCGTCATAGAAGGAGAACGCTGCTATT
TTCCGTCCTTGTTTTACGCGGAACAAAACGTCGCAAAACGCGTGCTCGACATTGCGGCCCAGACGGAGTATGCCGATCAG
TTTCCTGAATCGGAATTTCTTCTTGCGCTCGGTGAACTGGAAGAACGGATGAACGTTCAATACGCTCCGAGTCAAAAGGA
TGCGATTCAAAAAGCGCTGTCCTCGCCGATGCTTTTACTGACCGGGGGACCGGGCACGGGAAAAACGACCGTTATCAAAG
GCATCGTGGAATTGTACAGTGAACTGCACGGAGTATCGCTTGACCCTGGTGATTATAAAAAAGATGAAGCATTTCCGGTG
CTGCTTGCCGCGCCGACCGGAAGAGCCGCAAAGCGAATGAGCGAATCAACGGGTCTGCCGGCTGTTACGATTCACAGGCT
GCTCGGCTGGAATGGCGCTGAAGGCTTTACCTACAATGAAGATCAGCCGATTGAAGGGAAACTGATTATTATAGACGAAG
CGAGTATGCTCGATATTTGGCTCGCCAGCCATTTGTTTAAGGCGCTCCCTAAGCACATTCAGCTTATCGTCGTCGGTGAT
GAAGACCAGCTTCCTTCCGTAGGTCCCGGGCAGGTGCTGAGAGACCTTTTGGCTTCTGAGGTGCTGCCGACCGTGCGTCT
GACAGATATTTACCGTCAGGCTGAAGGGTCATCCATCGTTGAACTTGCGCATGATATGAAAAAGGGACTGCTTCCCAAAG
GGCTGACCGCGCCGACAAAGGACCGCTCGTTTATCCGCTGTAATTCTTCACAAATTAAAGAAGTCGTGGATCAAGTCGTC
TCGAATGCGCTAAAAAAGGGATATACTTCCAAAGACATTCAAGTGCTCGCGCCGATGTACAGGGGAAAAGCGGGAATTAA
CGAACTGAACGTGCTTCTTCAAGACATTATGAATCCGCCGAAAGAAAAAAGGCGGGAGCTGAAATTCGGAGATGTCGTCT
ACAGGACGGGCGATAAAATATTACAGCTTGTCAACCAGCCGGAAAACAATGTGTTTAACGGAGATATCGGCGAAATCGTG
TCTATCTTTTATGCCAAAGAAAATACGGAAAAAGAAGACATGGTCGTCGTCTCGTTTGACGGGAACGAAATCACCTTTAC
GAAAAAGGATTTCAGCCAGTTTACCCATGCTTACTGCTGTTCTATTCATAAGTCGCAGGGCAGCGAATTTCCGATTGTCG
TCCTGCCTGTCGTTAAAGGCTATTATCGAATGCTCAGGAGAAATCTCCTTTATACCGCGATTACAAGAGCCAAAAAATTT
CTGATTCTTTGCGGAGAAGAAGAAGCGCTTGAATGGGGCGTCAAAAACAATGATGCCACCGTCAGACAGACGTCACTTAA
AAACAGGCTCACAGAGCAGACTGAAGAGATGGATGCAGAACTGGCCGCCCTGCAAAAAGAGCTGCCGTTCAGTGTATACG
ATGCAAATATCGGAATGGAAGGCATCACGCCTTTTGACTTTATGGAAGAAAAAGCGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (154-244)

• AAA domain (AAA_30) (341-548)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (676-724)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (589-659)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	89.381	99.874	0.893